Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J01
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.68 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   3.6  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   8.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 532 SPWPTLAACVCYAYCAKELGPKLMANRK 615
           SP  T+A CVC   C +   P   +N K
Sbjct: 96  SPNSTIAVCVCMRKCPRRHRPVCASNGK 123


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/28 (32%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 744 LLSESNGHEDGEHVLVVLLQQVTE-FMD 824
           L+ + NG++DG +   V+++++ E F+D
Sbjct: 66  LIKKFNGYDDGGNFNEVVIREIAEIFLD 93


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 538 WPTLAACVCYAYCA-KELGPKLMANRKPFELRNILVVY 648
           WP      CY YC  ++ G  L+ +++   L  +L  +
Sbjct: 63  WPETRQLKCYMYCLWEQFG--LVDDKRELSLNGMLTFF 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,239
Number of Sequences: 438
Number of extensions: 3843
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)