Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_I18
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0362 - 22366668-22367516 175 3e-44
03_06_0626 - 35169352-35169546,35169736-35169948,35170102-351702... 174 9e-44
04_04_0143 - 23091613-23092467 173 2e-43
07_01_1055 - 9253936-9254130,9254271-9254483,9254588-9254758,925... 141 8e-34
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 129 3e-30
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 86 4e-17
11_04_0236 + 15215386-15216197,15216854-15218888,15219131-152200... 28 8.8
11_03_0187 - 11334733-11334802,11334975-11335055,11336087-113361... 28 8.8
09_02_0614 - 11249705-11249780,11249943-11250011,11251138-11251457 28 8.8
06_03_0489 - 21373236-21373311,21373474-21373542,21374468-21374988 28 8.8
06_02_0142 + 12261680-12261999,12263126-12263194,12263357-12263432 28 8.8
02_04_0119 + 19926766-19927085,19928212-19928280,19928751-199287... 28 8.8
>02_04_0362 - 22366668-22367516
Length = 282
Score = 175 bits (427), Expect = 3e-44
Identities = 86/159 (54%), Positives = 112/159 (70%)
Frame = +1
Query: 178 AAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKQLVVGEGTHFFIPWV 357
AA L ++ ++ALY VDGG RAVIFDRF GV EGTHF +PW+
Sbjct: 8 AASLLTKLAQAAAGLGIAASAASTALYTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWL 67
Query: 358 QRPIIFDIRSRPRNVPTITGSKDLQNVNITLRILFRPVPDQLPRIYTILGIDYDERVLPS 537
Q+P IFDIR+RP + + +G+KDLQ V++TLR+L RP D+LP I+T LG++YDE+VLPS
Sbjct: 68 QKPFIFDIRTRPHSFSSTSGTKDLQMVSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPS 127
Query: 538 ITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQ 654
I +EVLKAVVAQF+A +L+T+R VS V DSL RAA+
Sbjct: 128 IGNEVLKAVVAQFNADQLLTERPHVSALVRDSLIRRAAE 166
Score = 64.9 bits (151), Expect = 8e-11
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +2
Query: 641 REQHKFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFL 772
R +F ++LDD++ITHL +G EF+QAVE KQVAQQEAE++RFL
Sbjct: 162 RRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFL 205
>03_06_0626 -
35169352-35169546,35169736-35169948,35170102-35170272,
35170826-35170942,35171078-35171233
Length = 283
Score = 174 bits (423), Expect = 9e-44
Identities = 79/135 (58%), Positives = 107/135 (79%)
Frame = +1
Query: 247 SALYNVDGGHRAVIFDRFAGVKQLVVGEGTHFFIPWVQRPIIFDIRSRPRNVPTITGSKD 426
++LYNV+GGHRA++F+R G+K V EGTHF IPW +RPII+D+R+RP V + +GS+D
Sbjct: 29 NSLYNVEGGHRAIVFNRLEGIKDKVYPEGTHFMIPWFERPIIYDVRARPNLVESTSGSRD 88
Query: 427 LQNVNITLRILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQRE 606
LQ V I LR+L RP+P++LP IY LG +++ERVLPSI E LKAVVAQ++A +LITQRE
Sbjct: 89 LQMVRIGLRVLTRPLPEKLPTIYRSLGENFNERVLPSIIHETLKAVVAQYNASQLITQRE 148
Query: 607 IVSQKVNDSLTERAA 651
VS+++ LTERA+
Sbjct: 149 AVSREIRKILTERAS 163
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +2
Query: 656 FGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFL 772
F + LDD+SIT L+FGKEFT A+E KQVA QEAE+A+F+
Sbjct: 165 FNIALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFI 203
>04_04_0143 - 23091613-23092467
Length = 284
Score = 173 bits (421), Expect = 2e-43
Identities = 81/137 (59%), Positives = 106/137 (77%)
Frame = +1
Query: 244 NSALYNVDGGHRAVIFDRFAGVKQLVVGEGTHFFIPWVQRPIIFDIRSRPRNVPTITGSK 423
+++LY VDGG RAVIFDRF GV VGEGTHF +PW+Q+P +FDIR+RP N + +G+K
Sbjct: 29 SASLYTVDGGERAVIFDRFRGVLPETVGEGTHFLVPWLQKPFVFDIRTRPHNFSSNSGTK 88
Query: 424 DLQNVNITLRILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQR 603
DLQ VN+TLR+L RP LP I+T LG++YD++VLPSI +EVLKAVVAQF+A +L+T+R
Sbjct: 89 DLQMVNLTLRLLSRPDVVHLPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTER 148
Query: 604 EIVSQKVNDSLTERAAQ 654
VS V D+L RA +
Sbjct: 149 PHVSALVRDALIRRARE 165
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = +2
Query: 641 REQHKFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFL 772
R +F +ILDD++ITHL++G EF+QAVE KQVAQQEAE+++FL
Sbjct: 161 RRAREFNIILDDVAITHLSYGIEFSQAVEKKQVAQQEAERSKFL 204
>07_01_1055 -
9253936-9254130,9254271-9254483,9254588-9254758,
9255743-9255859,9257021-9257186,9258885-9258934,
9259095-9259268
Length = 361
Score = 141 bits (341), Expect = 8e-34
Identities = 67/116 (57%), Positives = 88/116 (75%)
Frame = +1
Query: 301 AGVKQLVVGEGTHFFIPWVQRPIIFDIRSRPRNVPTITGSKDLQNVNITLRILFRPVPDQ 480
+G V EGTHF IPW +RPII+D+R+RP V + +GS+DLQ V I LR+L RP+P++
Sbjct: 125 SGTIYQVYPEGTHFMIPWFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRPMPEK 184
Query: 481 LPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERA 648
LP IY LG +++ERVLPSI E LKAVVAQ++A +LITQRE VS+++ LTERA
Sbjct: 185 LPTIYRTLGENFNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERA 240
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +2
Query: 656 FGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFL 772
F + LDD+SIT L+FGKEFT A+E KQVA QEAE+A+F+
Sbjct: 243 FNIALDDVSITSLSFGKEFTHAIEAKQVAAQEAERAKFI 281
Score = 38.3 bits (85), Expect = 0.008
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +1
Query: 247 SALYNVDGGHRAVIFDRFAGVK 312
++LYNV+GGHRA++F+R G+K
Sbjct: 35 NSLYNVEGGHRAIVFNRIQGIK 56
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 129 bits (311), Expect = 3e-30
Identities = 64/113 (56%), Positives = 85/113 (75%)
Frame = +1
Query: 313 QLVVGEGTHFFIPWVQRPIIFDIRSRPRNVPTITGSKDLQNVNITLRILFRPVPDQLPRI 492
Q V EGT F I +RPII+D+R+RP V + +GS+DLQ V I LR+L RP+P++LP I
Sbjct: 216 QEVYPEGTQFMILLFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRPLPEKLPTI 275
Query: 493 YTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAA 651
Y LG +++ERVLPSI E LKAVVAQ++A +LITQRE VS+++ LTERA+
Sbjct: 276 YRSLGENFNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAS 328
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 656 FGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLG 775
F + LDD+SIT L+FGKEFT A+E K Q EA+ A+ +G
Sbjct: 330 FNIALDDVSITSLSFGKEFTHAIEAK---QGEAKSAQLIG 366
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 85.8 bits (203), Expect = 4e-17
Identities = 50/135 (37%), Positives = 76/135 (56%)
Frame = +1
Query: 277 RAVIFDRFAGVKQLVVGEGTHFFIPWVQRPIIFDIRSRPRNVPTITGSKDLQNVNITLRI 456
R + ++ + QL+ E +HF IPW +R IFD+ RP V + +GS+DLQ V L +
Sbjct: 323 REICNNKAVRLLQLLNPEKSHFSIPWFERLTIFDVCPRPNLVESTSGSRDLQMVRPGLGV 382
Query: 457 LFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSL 636
L RP+P + Y LG ++ ERVL S+ E LKAVVAQ++A +LI RE ++ ++
Sbjct: 383 LTRPLPTK----YRSLGDNFCERVLTSLMHETLKAVVAQYNASQLIIPRESFRKEFTHAI 438
Query: 637 TERAAQIRPHPRRHF 681
+ + R F
Sbjct: 439 ETKQVDEQEAQRAKF 453
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 695 TFGKEFTQAVELKQVAQQEAEKARFL 772
+F KEFT A+E KQV +QEA++A+F+
Sbjct: 429 SFRKEFTHAIETKQVDEQEAQRAKFI 454
>11_04_0236 +
15215386-15216197,15216854-15218888,15219131-15220017,
15222420-15226194
Length = 2502
Score = 28.3 bits (60), Expect = 8.8
Identities = 29/96 (30%), Positives = 45/96 (46%)
Frame = -2
Query: 564 NCFQNF*GNRWKYSFIIINTKNSVNSW*LIRNWSEEDTKCDVNILKIFTSSNSRNISGSR 385
N Q F N+ +Y FI+I+ +NSW IR+ + D C K+ T+S N++
Sbjct: 261 NELQEFLQNK-RY-FIVIDGLWDINSWNKIRS-ALPDDNCG---SKVVTTSGISNVARDV 314
Query: 384 PDVKYNWPLDPRNEEMCAFTNN*LLNTSKSIEDNSS 277
DV PL N + T ++ SK +E S+
Sbjct: 315 GDVYNLQPLSHGNSKKLLSTRL-YVDESKCLESTSA 349
>11_03_0187 -
11334733-11334802,11334975-11335055,11336087-11336155,
11337282-11337601
Length = 179
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 586 ELITQREIVSQKVNDSLTERAAQIRPHPRRH 678
+L+T+ +V Q + L A+ R HPR+H
Sbjct: 28 DLLTEATVVVQSTIEGLQNEASDHRHHPRKH 58
>09_02_0614 - 11249705-11249780,11249943-11250011,11251138-11251457
Length = 154
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 586 ELITQREIVSQKVNDSLTERAAQIRPHPRRH 678
+L+T+ +V Q + L A+ R HPR+H
Sbjct: 28 DLLTEATVVVQSTIEGLQNEASDHRHHPRKH 58
>06_03_0489 - 21373236-21373311,21373474-21373542,21374468-21374988
Length = 221
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 586 ELITQREIVSQKVNDSLTERAAQIRPHPRRH 678
+L+T+ +V Q + L A+ R HPR+H
Sbjct: 28 DLLTEATVVVQSTIEGLQNEASDHRHHPRKH 58
>06_02_0142 + 12261680-12261999,12263126-12263194,12263357-12263432
Length = 154
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 586 ELITQREIVSQKVNDSLTERAAQIRPHPRRH 678
+L+T+ +V Q + L A+ R HPR+H
Sbjct: 28 DLLTEATVVVQSTIEGLQNEASDHRHHPRKH 58
>02_04_0119 +
19926766-19927085,19928212-19928280,19928751-19928772,
19928817-19928933
Length = 175
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 586 ELITQREIVSQKVNDSLTERAAQIRPHPRRH 678
+L+T+ +V Q + L A+ R HPR+H
Sbjct: 28 DLLTEATVVVQSTIEGLQNEASDHRHHPRKH 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,519
Number of Sequences: 37544
Number of extensions: 343942
Number of successful extensions: 805
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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