Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_I16
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical ... 109 2e-24
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 31 1.6
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 29 6.3
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 29 6.3
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 6.3
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 29 6.3
U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related ... 28 8.3
U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related ... 28 8.3
U20861-14|AAN63440.1| 245|Caenorhabditis elegans Hypothetical p... 28 8.3
U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical p... 28 8.3
AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protei... 28 8.3
AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protei... 28 8.3
>AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical
protein H37A05.1 protein.
Length = 823
Score = 109 bits (263), Expect = 2e-24
Identities = 53/105 (50%), Positives = 71/105 (67%)
Frame = +3
Query: 330 MNYIGQFIANFREFYNEINAATLTGAIDVIVVEQPDGSFTCSPFHVRFGKLGVLRSRFKV 509
M+Y + N + FYN IN ATL+GAIDV+VVEQP+G + +PFHVRFGK GV K
Sbjct: 1 MDYAYRVFKNVKYFYNSINPATLSGAIDVVVVEQPNGEYKSTPFHVRFGKYGVFSYSDKY 60
Query: 510 VDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPIP 644
VD+ +NG +++ MKL +SG AFFVEE + + +L TSP+P
Sbjct: 61 VDIAVNGVEIDLKMKLADSGVAFFVEEADDQVPD---YLLTSPLP 102
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 363 REFYNEINAATLTGAIDVIVVEQPDGSFTCSPFHVRFGKL--GVLRSRF 503
R NE+ AT ID+ V+QP G++T F +R + +LR F
Sbjct: 153 RRITNEMQMATYVQQIDLSTVKQPVGAYTQGVFRIRMLRFAEAILRRTF 201
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 363 REFYNEINAATLTGAIDVIVVEQPDGSFTCSPFHVRFGKL--GVLRSRF 503
R NE+ AT ID+ V+QP G++T F +R + +LR F
Sbjct: 153 RRITNEMQMATYVQQIDLSTVKQPVGAYTQGVFRIRMLRFAEAILRRTF 201
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 144 NHTKFLKWIIIILSKATLYVFLVPTLWGN*RRFRE--NEAYVKE--DTYSINFKTRLYGK 311
NH K LKW ++ +AT Y+ L + ++F+E ++A KE DTYS+ T L K
Sbjct: 75 NHFKALKWNAVLTGQATEYMATKEKLECS-KKFKELLDKALAKEPKDTYSVASLTWLEKK 133
Query: 312 PAVMY 326
A +
Sbjct: 134 LAATF 138
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 136 NIYRTNNNIHFFNNLIQEESLCLK 65
NI TN N+ FF N++ E+ LC++
Sbjct: 96 NIILTNLNLIFFKNIVCEQHLCVR 119
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 558 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 616
Query: 403 PVS 395
P S
Sbjct: 617 PTS 619
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 558 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 616
Query: 403 PVS 395
P S
Sbjct: 617 PTS 619
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -2
Query: 562 SPSFMWIFKGSPFNSRSTTLNLDR--STP-----SFPKRTWNGEQVKLPSGCSTTMTSIA 404
SPS WI +G P +SRS+T ++ R STP S P + S +TT ++A
Sbjct: 555 SPS-SWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTTTTATVA 613
Query: 403 PVS 395
P S
Sbjct: 614 PTS 616
>U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related
protein 2, isoform b protein.
Length = 482
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 489 LRSRFKVVDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPI 641
++SR + VD+E+ EP N E E F EEV E AE LAT I
Sbjct: 312 IKSRVERVDVEVKLEPCN-----DEDDE--FSEEVDEQTAELEEQLATEAI 355
>U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related
protein 2, isoform a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 489 LRSRFKVVDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPI 641
++SR + VD+E+ EP N E E F EEV E AE LAT I
Sbjct: 378 IKSRVERVDVEVKLEPCN-----DEDDE--FSEEVDEQTAELEEQLATEAI 421
>U20861-14|AAN63440.1| 245|Caenorhabditis elegans Hypothetical
protein C28H8.11b protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 175 IIIHFRNLVWFRYNIYRTNNNIHFFNNLIQEESLCLK 65
I+IH + +WF+ I+ +N NN I +E+ LK
Sbjct: 70 IVIHQAHELWFKQIIFDLDNVRKLLNNTIVDETKTLK 106
>U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical
protein C28H8.11a protein.
Length = 403
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 175 IIIHFRNLVWFRYNIYRTNNNIHFFNNLIQEESLCLK 65
I+IH + +WF+ I+ +N NN I +E+ LK
Sbjct: 70 IVIHQAHELWFKQIIFDLDNVRKLLNNTIVDETKTLK 106
>AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protein
protein.
Length = 482
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 489 LRSRFKVVDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPI 641
++SR + VD+E+ EP N E E F EEV E AE LAT I
Sbjct: 312 IKSRVERVDVEVKLEPCN-----DEDDE--FSEEVDEQTAELEEQLATEAI 355
>AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protein
protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 489 LRSRFKVVDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPI 641
++SR + VD+E+ EP N E E F EEV E AE LAT I
Sbjct: 378 IKSRVERVDVEVKLEPCN-----DEDDE--FSEEVDEQTAELEEQLATEAI 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,011,404
Number of Sequences: 27780
Number of extensions: 418883
Number of successful extensions: 1175
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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