Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_I14
         (989 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709...    29   7.6  

>12_01_0777 -
           7095081-7096259,7096636-7096725,7096827-7096902,
           7097150-7097367,7097502-7097717,7097922-7098107,
           7098181-7098303,7098399-7098514,7099254-7099832,
           7101485-7101517,7102485-7103679,7103732-7103797,
           7104843-7104905,7105328-7105411
          Length = 1407

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = -2

Query: 382 SDRRQLSV---LLQQFLHLDKYFMYNDSQRGY 296
           SD R+L+V   L++QF+ LD++  + D  RGY
Sbjct: 444 SDHRKLAVEKILIEQFIGLDEFDGHEDISRGY 475


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,895
Number of Sequences: 37544
Number of extensions: 237222
Number of successful extensions: 412
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)