Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_I14
         (989 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               25   1.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   5.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   5.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   5.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   9.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   9.8  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 309 LSLYIKYLSRCKNCCSKTDSCL--LSDIVCRCNVL 407
           +S+ +K LS C N    TD C   L+ I+C   +L
Sbjct: 108 ISIDVKMLSECINANKSTDKCENGLNFIICFSKLL 142


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 536 NEAFVMCCTYIYC*IIF 586
           NEAF +CC   Y  I+F
Sbjct: 212 NEAFYICCEEPYPDIVF 228


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 339 CKNCCSKTDSCLLSD 383
           CK C SKT  C   D
Sbjct: 437 CKTCNSKTKCCFAQD 451


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 345 NCCSKTDSCLLSDIVCRCNVLIGGISINYER 437
           N    +DS    ++ C+C+  + GI  +Y+R
Sbjct: 91  NSFLSSDSASSGNVYCKCDDCLLGIVDDYQR 121


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 424 IEIPPIRTLHLHTISDRRQLSV 359
           I +   RTL  H +S RR+ +V
Sbjct: 266 IAVNGYRTLFFHPLSSRREFAV 287


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 312 IANAVISNVNKYRKYIYW 259
           I N   +N NKY+ Y  W
Sbjct: 134 INNTNNNNTNKYKDYYIW 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,282
Number of Sequences: 438
Number of extensions: 3078
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32774469
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)