Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_I09
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82062-1|CAB04889.2|  183|Caenorhabditis elegans Hypothetical pr...   153   2e-37
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z82062-1|CAB04889.2|  183|Caenorhabditis elegans Hypothetical
           protein W02A11.2 protein.
          Length = 183

 Score =  153 bits (371), Expect = 2e-37
 Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
 Frame = +3

Query: 204 FPRFFTIQPHTETRSKQLEAWEQLITDYLKATKQSTIDIREASNTPLFNNIEINRKLSQE 383
           FP FFTIQ    T+ KQLEAW +L+ DY +  K  ++DI EA+ + LFNN ++NR+LS +
Sbjct: 19  FPPFFTIQKSLNTKDKQLEAWARLVIDYAQHNKIYSLDIAEATTSELFNNQKLNRRLSTD 78

Query: 384 AILTILEDMAKAGKAAPIDKSKNVWEVYWHSLDEWGNMIYNWACNNGFNNSVCTLFELRE 563
            + T+L+ + +       D  +  + ++W   D W NMIY WA  N F N+  TL+E+  
Sbjct: 79  GVNTVLQYLEQKKLIEFTDNGRTRFHIFWRRPDVWANMIYQWAVENAFINTPLTLYEITH 138

Query: 564 GDNTADQEFHNLDMNVLVKALKSLEAKGRCELMEF-DDNQGVKF 692
           GD+T ++ FHNL+  +L+KAL  LE + R +LM    DN+GVKF
Sbjct: 139 GDDTTNESFHNLEREILMKALTCLEEQRRAQLMNIGGDNEGVKF 182



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 164 TSMAEISWPWQYNFPP 211
           T+ +   WPWQY+FPP
Sbjct: 6   TTASAFKWPWQYDFPP 21


>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
           protein F48F5.1 protein.
          Length = 1291

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +3

Query: 294 ATKQSTIDIREASNTPLFNNIEINRKLSQEAILTILEDMAKAGKAAPIDKS 446
           A  Q   D+ +   +  F +I  N+ LS+  I+ ++ED+ K+GK A I ++
Sbjct: 376 ALDQLEKDVADFVKSLTFTDIN-NQTLSEGEIVKVVEDIKKSGKLAKIQEN 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,463,811
Number of Sequences: 27780
Number of extensions: 408462
Number of successful extensions: 1029
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)