Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_I09
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   1.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   1.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   4.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   8.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   8.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   8.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   8.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 368 SINFYVIEKRCV*CLPDIYCRLFCCLQ 288
           SI+FYV    C+  L  IYCRL+C  Q
Sbjct: 198 SISFYV---PCIVML-GIYCRLYCYAQ 220


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = +2

Query: 26  REFL-KIWTFHEHQVN 70
           REF+ KIW F E+Q+N
Sbjct: 144 REFMQKIWPFKEYQMN 159


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 435 IDKSKNVWEVYWH 473
           + + KN++E++WH
Sbjct: 32  VTRQKNIYELFWH 44


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 435 IDKSKNVWEVYWH 473
           + + KN++E++WH
Sbjct: 32  VTRQKNIYELFWH 44


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 130 SLVFYNYSVVFHEYGRNIVALA 195
           SLVF N   V HEY +N+  L+
Sbjct: 480 SLVFPNDIKVDHEYDQNVWVLS 501


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -1

Query: 148 NYKRLMKIFNYTKMLVIFQLFSRLDKIDLMFVKSPNLKEF 29
           N+ RLM   N++K  ++  +FS  D+ +   ++   L++F
Sbjct: 222 NHARLMSQDNHSKEYLVSIMFSHYDRNNNGNLEREELEQF 261


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 866 LWQNEFMALNKSPSYDSMS 810
           +W+N+   L KSPS  S++
Sbjct: 217 VWKNDEGTLRKSPSLTSLN 235


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 866 LWQNEFMALNKSPSYDSMS 810
           +W+N+   L KSPS  S++
Sbjct: 217 VWKNDEGTLRKSPSLTSLN 235


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 866 LWQNEFMALNKSPSYDSMS 810
           +W+N+   L KSPS  S++
Sbjct: 268 VWKNDEGTLRKSPSLTSLN 286


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 866 LWQNEFMALNKSPSYDSMS 810
           +W+N+   L KSPS  S++
Sbjct: 217 VWKNDEGTLRKSPSLTSLN 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,490
Number of Sequences: 438
Number of extensions: 5227
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)