Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_I08
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 38 0.014
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.058
11_06_0610 - 25449085-25453284 34 0.18
07_01_0862 - 7172083-7172931 31 0.95
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.2
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 30 2.2
04_01_0034 - 401208-402923 30 2.2
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 30 2.9
03_01_0558 + 4155220-4155642,4156292-4156348,4157030-4157165,415... 29 3.8
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 5.1
01_01_0046 - 331758-332627 29 6.7
03_01_0515 - 3864796-3865425 28 8.8
01_07_0082 - 40965947-40967023 28 8.8
>10_08_0161 +
15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 254 KKXXXGGGXPPXGGGGXXKKKKKXXGGGXXKKKXXKKK 367
KK GGG GGGG K KK+ GGG KK +K
Sbjct: 231 KKDGAGGGDKKDGGGGDKKDKKEGGGGGGDKKDAGGEK 268
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 293 GGGXXKKKKKXXGGGXXKKKXXKKK 367
GGG KK +K GGG KK K+K
Sbjct: 120 GGGDDKKAEKEKGGGGGDKKAEKEK 144
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 290 GGGGXXKKKKKXXGGGXXKKKXXKKK 367
GGGG KK +K GGG K+ K K
Sbjct: 132 GGGGGDKKAEKEKGGGDKPKEEKKAK 157
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.058
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP K P G PPP K PP P K PPPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP K P GPPP K PP KK PPP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP K P PPP K PP K PP K PPPP
Sbjct: 314 PPPPPPKPAAAAPP--PPPPPKAAPPPPPPKGPP-------PPPPAKGPPPP 356
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 742 RXPPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
+ PPP P PPP PP K PP K PPPP
Sbjct: 1166 KSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPP 1219
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 742 RXPPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
+ PPP P PPP PP K PP K PPPP
Sbjct: 1150 KSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPP 1203
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 742 RXPPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPP 900
+ PPP P PPP PP K PP +K PPP
Sbjct: 1198 KSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPP 1250
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP K P PPP K P PP PPPP
Sbjct: 1129 PPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPP 1180
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP K P PPP K P PP PPPP
Sbjct: 1193 PPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPP 1244
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP+ K PPP + PP PP PP P
Sbjct: 549 PPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTP 600
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPP 900
PPP K P PPP K P PP PPP
Sbjct: 1273 PPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPPAPVSLPPP 1323
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/51 (25%), Positives = 16/51 (31%)
Frame = +1
Query: 751 PPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PP + PPP ++ PP PP PPPP
Sbjct: 581 PPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPP 631
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 751 PPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PP++K P PP P K PP +K P PP
Sbjct: 775 PPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPP 825
>07_01_0862 - 7172083-7172931
Length = 282
Score = 31.5 bits (68), Expect = 0.95
Identities = 24/70 (34%), Positives = 26/70 (37%)
Frame = +1
Query: 640 PXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGPPPXXKKK 819
P P + KK PPP +KK F PP KK P PPP KK
Sbjct: 132 PPPPPTAEEKKLLLFPPPLPPRKKAM----LFPLPLPPRKK-------PLLYPPPLPPKK 180
Query: 820 XXXPPXKXPP 849
PP PP
Sbjct: 181 KPLPPPSPPP 190
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 751 PPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPP 849
PPKKK P PP K+ PP PP
Sbjct: 177 PPKKKPLPPPSPPPQPPLPEKENTPLPPLLLPP 209
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXP---PXXXFXXXXXXXKKXPPPP 903
PP + P G PPP PP P P F ++ PPPP
Sbjct: 32 PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPP 86
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 242 KKXIKKXXXGGGXPPXGGGGXXKKKKKXXGGG 337
K+ + G G GGGG KK KK GGG
Sbjct: 198 KQPVAPPGNGNGGGGGGGGGGKKKGKKGGGGG 229
>04_01_0034 - 401208-402923
Length = 571
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPP-XXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP++++ K P PPP + PP K KK PPP
Sbjct: 310 PPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCKRPDGCERFATRIKKPAPPP 362
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPP 849
PPP +K K P PPP K PP PP
Sbjct: 91 PPPAQKPSKVSPPP--PPPQKSAKVSPPPAAKPP 122
>03_01_0558 +
4155220-4155642,4156292-4156348,4157030-4157165,
4158378-4158514,4159509-4159632,4160111-4160568
Length = 444
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 269 GGGXPPXGGGGXXKKKKKXXGGGXXKKKXXKKKXXF 376
GGG GGGG K KKK K++ + + F
Sbjct: 19 GGGKRKKGGGGGKKAKKKVAAAASQKQRKLQSRLSF 54
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXK----XPPXXXFXXXXXXXKKXPPPP 903
P P K P PPP K PP K PP K PPPP
Sbjct: 575 PMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPP 630
>01_01_0046 - 331758-332627
Length = 289
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 336 PPPXFFFFFXXXPPPPXGGXPPP 268
PP ++F + PPPP PPP
Sbjct: 9 PPQRYWFPYWTSPPPPPPPPPPP 31
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP P PPP PP PP K PPPP
Sbjct: 75 PPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP-------PSPVKSSPPPP 119
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -1
Query: 336 PPPXFFFFFXXXPPPPXG--GXPPP 268
PPP + + + PPPP G PPP
Sbjct: 256 PPPQYGYGYPAQPPPPQAGYGYPPP 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,762,609
Number of Sequences: 37544
Number of extensions: 326919
Number of successful extensions: 1732
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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