Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_I08
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 37 0.017
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 37 0.017
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal prote... 29 4.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.0
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.9
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 37.1 bits (82), Expect = 0.017
Identities = 26/95 (27%), Positives = 37/95 (38%)
Frame = +1
Query: 619 PXXGGXFPXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGP 798
P GG P P G+ + + GPPP GG+ PP +++ P GP
Sbjct: 673 PPGGGQGPPPPPQGQ--QYYGGPPPPGQPYGPPGGY-------PPQQQRPPYQAQPYPGP 723
Query: 799 PPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PP +++ P PP + PPPP
Sbjct: 724 PPPQQQRGYGYP---PPPQPGHPYQQPYGQMPPPP 755
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 37.1 bits (82), Expect = 0.017
Identities = 26/95 (27%), Positives = 37/95 (38%)
Frame = +1
Query: 619 PXXGGXFPXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGP 798
P GG P P G+ + + GPPP GG+ PP +++ P GP
Sbjct: 673 PPGGGQGPPPPPQGQ--QYYGGPPPPGQPYGPPGGY-------PPQQQRPPYQAQPYPGP 723
Query: 799 PPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PP +++ P PP + PPPP
Sbjct: 724 PPPQQQRGYGYP---PPPQPGHPYQQPYGQMPPPP 755
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/73 (26%), Positives = 23/73 (31%)
Frame = +1
Query: 685 PPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFX 864
PPP +K GG PPP + P PPP P + PP
Sbjct: 123 PPPPPPRKSRAGG-----SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
Query: 865 XXXXXXKKXPPPP 903
+ PP P
Sbjct: 178 PEPRNPPRTPPSP 190
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 336 PPPXFFFFFXXXPPPPXGGXPPPXXXF 256
PPP F PPP GG PPP F
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 191 FFXFILGXFXXXSRXXKKKXIKKXXXGGGXPPXGGGGXXKKKKKXXGGG 337
FF +LG +R + + GGG GGGG ++ GGG
Sbjct: 32 FFRSLLGFTSPTNRNSNSQDYRNIVRGGGVNGAGGGGNAYRRNGGGGGG 80
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 333 PPXFFFFFXXXPPPPXGGXPPPXXXFL 253
PP F FF PPPP G PPP F+
Sbjct: 290 PPPFGFF----PPPPRGHFPPPPPHFM 312
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 333 PPXFFFFFXXXPPPPXGGXPPPXXXFL 253
PP F FF PPPP G PPP F+
Sbjct: 290 PPPFGFF----PPPPRGHFPPPPPHFM 312
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXG-GPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
P P K P PPP K P K PP K PPPP
Sbjct: 158 PEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
>U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 25 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 284 PXGGGGXXKKKKKXXGGGXXKKKXXKK 364
P GG KKK+ GGG KKK K
Sbjct: 7 PKGGKAPPSKKKEGSGGGKAKKKKWSK 33
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP + + P G PPP + PP + PP PP P
Sbjct: 40 PPPPWHRNRGPPPFGPPPPWDR---PPPPWRRPPWHRRPPWGLPPPPPPPEP 88
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = +1
Query: 619 PXXGGXFPXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGP 798
P GG P P GG GPPP GG PPP P P
Sbjct: 721 PITGGPPPPPPPGG-LPPITGGPPPPPPP----GGLPPI-SGGPPPPPPPPGGCPPPPPP 774
Query: 799 PPXXKKKXXXPPXKXP 846
PP K PP P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP GGPPP PP PP K PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP------PPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = +1
Query: 619 PXXGGXFPXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGP 798
P GG P P GG GPPP GG PPP P P
Sbjct: 721 PITGGPPPPPPPGG-LPPITGGPPPPPPP----GGLPPI-SGGPPPPPPPPGGCPPPPPP 774
Query: 799 PPXXKKKXXXPPXKXP 846
PP K PP P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP GGPPP PP PP K PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP------PPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = +1
Query: 619 PXXGGXFPXPXRGGKXKKXFXGPPPQXAQKKXXGGFWXF*XRXPPPKKKKXKXXXPXGGP 798
P GG P P GG GPPP GG PPP P P
Sbjct: 304 PITGGPPPPPPPGG-LPPITGGPPPPPPP----GGLPPI-SGGPPPPPPPPGGCPPPPPP 357
Query: 799 PPXXKKKXXXPPXKXP 846
PP K PP P
Sbjct: 358 PPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 748 PPPKKKKXKXXXPXGGPPPXXKKKXXXPPXKXPPXXXFXXXXXXXKKXPPPP 903
PPP GGPPP PP PP K PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP------PPGGFKGGPPPP 370
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 336 PPPXFFFFFXXXPPPPXGGXPPPXXXFLXXF 244
PPP FF PPPP PPP FL F
Sbjct: 777 PPP--FFALPVPPPPPV--PPPPPPPFLTCF 803
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 300 PPPPXGGXPPPXXXFLXXF 244
PPPP GG PPP + F
Sbjct: 1603 PPPPNGGPPPPSVEWTSRF 1621
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 336 PPPXFFFFFXXXPPPPXGGXPPP 268
PPP + PPPP G PPP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPP 729
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,107,472
Number of Sequences: 27780
Number of extensions: 186605
Number of successful extensions: 764
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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