Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_I06
(907 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 61 1e-09
01_05_0552 - 23173106-23173184,23173266-23173411,23173543-231740... 46 3e-05
05_01_0320 - 2524700-2524810,2525075-2525183,2525607-2525683,252... 34 0.18
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 33 0.31
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 32 0.72
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 31 0.95
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 31 0.95
11_01_0619 - 4961588-4962409 30 2.2
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 30 2.2
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 30 2.2
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 30 2.2
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 30 2.9
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 30 2.9
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 3.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 29 6.7
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 29 6.7
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 28 8.9
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 28 8.9
02_02_0724 + 13349419-13349641,13349880-13349974,13350366-133506... 28 8.9
>09_06_0204 -
21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Frame = +2
Query: 416 IAGVKVNLPVNPYGTQKALIHQVIKTIKAAQ-----NCLLESPTGSGKTLALLCGTLAW 577
+ GV V P PYGTQ A + +VI T+ A+ + LLESPTG+GK+L+LLC LAW
Sbjct: 27 VGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAW 85
>01_05_0552 -
23173106-23173184,23173266-23173411,23173543-23174022,
23174106-23174161,23175538-23175637,23175708-23175765,
23176163-23176278,23176915-23176974,23177297-23177383,
23178250-23178341,23178409-23178587,23178946-23179087,
23179655-23179706,23180241-23180473,23180569-23180745,
23180882-23181044,23181242-23181392,23181493-23181574,
23182193-23182332,23182499-23183013
Length = 1035
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 491 TIKAAQNCLLESPTGSGKTLALLCGTLAW 577
+I+ +N LLESPTG+GKTL LLC LAW
Sbjct: 67 SIRQGKNALLESPTGTGKTLCLLCSALAW 95
>05_01_0320 -
2524700-2524810,2525075-2525183,2525607-2525683,
2525795-2525873,2526058-2526147,2526779-2526903,
2527288-2527468,2527712-2527905,2528008-2528411,
2528519-2528605,2528802-2529582
Length = 745
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 416 IAGVKVNLPVNP-YGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALL 559
+ G+ V+ P Y Q A + ++ + + A + LLE PTG+GKT AL+
Sbjct: 5 LEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTSALI 53
>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +1
Query: 415 DSRSESESTSKPLWDSEGVDTSGNKDHKSCSELSAGKSN--WIG*NISTA--MWNTGLA- 579
+S +S S W S GVD S NKD +S + A S+ W +S +WN+ A
Sbjct: 1755 ESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSAWNAAPVSQGDDVWNSAEAN 1814
Query: 580 AGRNRTYK 603
RN+ +K
Sbjct: 1815 ESRNKDWK 1822
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 31.9 bits (69), Expect = 0.72
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 386 PRKQNEITIMIAGVKVNLPVNPYGTQK-ALIHQVIKTIKAAQNCLLESPTGSGKTLALL 559
P N ++ G+ L + P QK +++H V IK + LL P G+GKT LL
Sbjct: 34 PTILNTYANVLEGLANTLHITPNRKQKISILHNVSGIIKPHRMTLLLGPPGAGKTTLLL 92
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 31.5 bits (68), Expect = 0.95
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 386 PRKQNEITIMIAGVKVNLPVNPYGTQKA-LIHQVIKTIKAAQNCLLESPTGSGKTLALL 559
P N TI++ G+ L + T K ++H V IK + LL P GSGKT LL
Sbjct: 135 PTILNTYTIIMEGLTNALCITKKITHKIPILHNVSGIIKPHRMTLLLGPPGSGKTSLLL 193
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 31.5 bits (68), Expect = 0.95
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 479 QVIKTIKAAQNCLLESPTGSGKTLALL 559
Q + + + Q+C+L + TGSGKTLA L
Sbjct: 70 QSLPVLLSGQDCILHAQTGSGKTLAYL 96
>11_01_0619 - 4961588-4962409
Length = 273
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 313 PTVKSTKKSE--VIKKLFTKEKSPDGPPXAK*NNDYDSRSESESTSKPLWDSEGVDTSGN 486
P ++ K+ E ++K KEKS +K Y SRS+S+S+ ++DS+ +
Sbjct: 144 PDLEKEKEEERKLMKAKLKKEKSEKSKRKSK--RKYRSRSDSDSSEASVFDSDSESSVTG 201
Query: 487 KDHKSCSELSAGKSN 531
++ S S S S+
Sbjct: 202 SEYSSGSSSSYSSSD 216
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 479 QVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINK 607
Q I + Q+ L+++ TG+GKTLA L + LQ R+ +
Sbjct: 53 QAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVER 95
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 386 PRKQNEITIMIAGVKVNLPVNPYGTQK-ALIHQVIKTIKAAQNCLLESPTGSGKTLALL 559
P N +T + + L + P Q ++H V IK + LL P GSGKT LL
Sbjct: 137 PTLLNSVTNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLL 195
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 386 PRKQNEITIMIAGVKVNLPVNPYGTQKA-LIHQVIKTIKAAQNCLLESPTGSGKTLALL 559
P N +T + G L + P Q ++H V +K + LL P GSGKT LL
Sbjct: 159 PTVLNSMTNKLEGAANALGILPNKKQTMPILHDVSGIVKPRRMTLLLGPPGSGKTTLLL 217
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 479 QVIKTIKAAQNCLLESPTGSGKTLALL 559
Q I + + + C +PTGSGKTLA L
Sbjct: 175 QAIPILLSGRECFACAPTGSGKTLAFL 201
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 645 TRWMTQQATQTTENTLTILSPLKCPSPSLNTVKKAYTVHRRSSIVRPGTMQCH 803
T W Q QTT +TL S CP + TV + T +S ++ G+ CH
Sbjct: 1685 TAWDVQPEMQTTTSTLDSPSARMCPDNNNQTVHQPDT---STSPLQEGSTSCH 1734
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 488 KTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAE 589
+ + ++C++ +GSGKTLA LC + L+ E
Sbjct: 272 RPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKE 305
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 364 KEKSPDGPPXAK*NNDYDSRSESESTSKPLWDSEGVD 474
+++S G ++ + SES STS P WD++G D
Sbjct: 20 EDRSLSGESLSEWRSCEQVESESPSTSPPFWDTDGDD 56
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 485 IKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKL 610
+ + A + +L S TGSGKTLA L L +Q EIE +L
Sbjct: 141 VPAVLAGTSVVLGSHTGSGKTLAYL---LPLVQIEIENTYRL 179
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 395 QNEITIMIAGVKVNLPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKT--LALLCG 565
+++ + + G K + P GT++ L++++ +K LL +GSGKT L LL G
Sbjct: 164 RSKANVFVLGRK-RVSYRPPGTEQNLLNEISLNLKEKSFGLLFGRSGSGKTTLLQLLAG 221
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 467 ALIHQVIKTIKAAQNCLLESPTGSGKT--LALLCGTL 571
+++H V +K + LL P GSGKT L L GTL
Sbjct: 164 SILHNVSGIVKPHRMTLLLGPPGSGKTSLLMALAGTL 200
>02_02_0724 +
13349419-13349641,13349880-13349974,13350366-13350653,
13352838-13352963,13353045-13353204,13354142-13354190,
13354502-13354772,13356071-13356196,13357076-13357231,
13357815-13358058,13358181-13358627,13359348-13359478
Length = 771
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 557 LCGTLAWLQAEIERINKLQMESYFE-EIFENKMDDSAG 667
LC A+LQ E+E++ ++ +S E E+++ ++ S+G
Sbjct: 240 LCAEEAYLQQELEKLQDMRNKSKLEGELWDERISSSSG 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,967,291
Number of Sequences: 37544
Number of extensions: 375831
Number of successful extensions: 1037
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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