Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_I02
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258...    29   4.9  

>04_04_0717 -
           27525117-27525248,27525384-27525549,27525629-27525831,
           27525911-27526048,27526642-27526725,27526864-27526950,
           27527048-27527120,27527169-27527432,27527692-27527768,
           27527886-27527957,27528049-27528209,27528238-27528484,
           27528588-27528707,27528846-27528929,27529205-27529341,
           27529689-27529856,27530093-27530317,27530865-27530952,
           27531033-27531194,27532797-27532919
          Length = 936

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
 Frame = +2

Query: 488 LLKLPVLISNV*RGSLNTLET-IQHINIDSQ*FVAKIQKEVTKEGVTMTAKTAILNKQ-C 661
           L ++P  +S     S+  L+  IQ +  +    + K+++   + G  +T      N Q C
Sbjct: 388 LAEIPERVSTYCESSIADLKKDIQKLCDEKNMLILKLEEASREPGAVVTIHFTKSNFQTC 447

Query: 662 LKRNSEYLRNYIT*RYKYLT-----EVDSQQSAAKIHKEVTMEVNTL 787
           L +     RN +  ++K L      E+ + QS    HKE ++E+N+L
Sbjct: 448 LAKAG---RNQVITKFKALVSSIPREMGAMQSEMTKHKEASLELNSL 491


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,700
Number of Sequences: 37544
Number of extensions: 258752
Number of successful extensions: 518
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)