Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H22
(893 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 1.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 1.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 1.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 1.2
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 1.2
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 1.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.8
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 2.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 5.0
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 1.2
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 478 TRHYLTVVN*EGYREYILSMVLESS 404
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.2
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 QWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL 244
Q S ++ N ++K ET K R R + + PK I+SS +KT+ +K
Sbjct: 47 QKSYKNENSYRKYRETWKERSRDRTER----ERSREPK----IISSLSNKTIHNNNNYKY 98
Query: 245 TRDENNYGIPQKRLYGHSHFISDV 316
+ NNY K+LY + ++I +
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.2
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 QWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL 244
Q S ++ N ++K ET K R R + + PK I+SS +KT+ +K
Sbjct: 47 QKSYKNENSYRKYRETWKERSRDRTER----ERSREPK----IISSLSNKTIHNNNNYKY 98
Query: 245 TRDENNYGIPQKRLYGHSHFISDV 316
+ NNY K+LY + ++I +
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.2
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 QWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL 244
Q S ++ N ++K ET K R R + + PK I+SS +KT+ +K
Sbjct: 47 QKSYKNENSYRKYRETWKERSRDRTER----ERSREPK----IISSLSNKTIHNNNNYKY 98
Query: 245 TRDENNYGIPQKRLYGHSHFISDV 316
+ NNY K+LY + ++I +
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQI 122
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 1.2
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 478 TRHYLTVVN*EGYREYILSMVLESS 404
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -2
Query: 478 TRHYLTVVN*EGYREYILSMVLESS 404
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -2
Query: 475 RHYLTVVN*EGYREYILSMVLESS 404
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.8
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 QWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL 244
Q S ++ N ++K ET K R R + + PK I+SS ++T+ +K
Sbjct: 47 QKSYKNENSYRKYRETWKERSRDRTER----ERSREPK----IISSLSNRTIHNNNNYKY 98
Query: 245 TRDENNYGIPQKRLYGHSHFISDV 316
+ NNY K+LY + ++I +
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQI 122
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 7/37 (18%)
Frame = -3
Query: 807 CGLRGGGVCHHSDPTTSPSCP-------YHQMHTKEP 718
C L+ V H P P +HQMHT+ P
Sbjct: 141 CKLQAAAVDHQGSVLDGPDSPPLVESQMHHQMHTQHP 177
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 544 WTQRLGVMCQILTQSCQPHYCI-LW 615
W+ LG +C + + C P Y I +W
Sbjct: 527 WSHVLGWLCGLSSMLCIPGYMIYIW 551
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 544 WTQRLGVMCQILTQSCQPHYCI-LW 615
W+ LG +C + + C P Y I +W
Sbjct: 580 WSHVLGWLCGLSSMLCIPGYMIYIW 604
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 5.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 596 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 709
P +S W + W L CKL+ S Y++ +T+
Sbjct: 88 PFELSVFWQQYPWQWGLGICKLRAYVSETSSYVSVLTI 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,111
Number of Sequences: 438
Number of extensions: 6092
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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