Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H20
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 36 0.055
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156 35 0.073
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 34 0.13
05_03_0368 - 13127536-13128429 32 0.51
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409... 32 0.68
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 31 0.90
04_04_0377 - 24816834-24817049,24817128-24817174,24817262-248174... 31 1.6
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 30 2.1
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 30 2.1
07_03_1393 - 26245105-26246862 30 2.7
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 30 2.7
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 6.3
05_01_0146 - 953957-956278,956468-956786,957185-957213 29 6.3
01_01_0590 + 4396958-4397155,4397246-4397335,4397445-4397583,439... 28 8.4
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 35.5 bits (78), Expect = 0.055
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 247 LTSRRRHNTQAEPDGALKETTA--ADHGNIITKKGSHSDTDILSANEQKKRKIRKLKLDV 420
+TSR Q D LKE A A + N T + S S +++++ K + V
Sbjct: 278 MTSRYAQEMQTI-DELLKERNAIHASYTNNTTLQRSSSSNKGKTSSKESKSDDDQT---V 333
Query: 421 KKASQSMTRSLDFTNNDDDGSNAENTPKHKL 513
KK +S ++S++ + +DDDG E PK +L
Sbjct: 334 KKEKKSKSKSMEGSRSDDDGPRKEKKPKERL 364
>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
Length = 598
Score = 35.1 bits (77), Expect = 0.073
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +1
Query: 274 QAEPDGALKETTAADHGNIITKKGSHSDTDILS-----ANEQKKRKIRKLKLDVKKASQS 438
Q+ PDG L+ A+ I S+ D +L ++ + + + +D+ +
Sbjct: 333 QSLPDGELRPVPGANSSRAIPYFSSYDDGWLLEYQCFGRRDRIRNPLSRAAIDIPRCFDQ 392
Query: 439 MTRSLDFTNNDDDGSNAENTPKHKL 513
RSLD+ D+DGS++ N ++ L
Sbjct: 393 RIRSLDYFLGDNDGSHSINPAEYTL 417
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 219 NKRRPSEGVFDEPPSTQHAGRAGWSLEGDHR--RRSWKH---NNKKRLSLRHRHFIRERA 383
N RPS G+ + P + GR ++ G R +R+ K + KKRL RH+ +R+ A
Sbjct: 27 NPSRPSLGLTNALPWRRRGGRGAGAVAGAVRCAKRTGKRRYPSEKKRLDRRHKELLRKAA 86
Query: 384 EEE 392
EE
Sbjct: 87 PEE 89
>05_03_0368 - 13127536-13128429
Length = 297
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 306 HRRRSWKHNNKKRLSLRHRHFIRERAEEEENKKIKTRRQESQSIDDQ 446
HRR S K + KK R E +E + +KKIK R S +++
Sbjct: 212 HRRSSSKEDKKKSRRKRRERSCEEDSETDSDKKIKRRHHRKSSKEER 258
>03_05_0510 +
25039408-25039455,25040627-25040641,25040832-25040991,
25041116-25041192,25041324-25042528,25042537-25042621,
25043068-25043130,25043207-25043263,25043299-25043361,
25043560-25043643,25043730-25044320,25044535-25044663
Length = 858
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 291 SLEGDHRRRSWKHNNKKRLSLRHRHFIRERAEEEENKKI---KTRRQESQSIDDQ 446
SL+G + S + ++RL LR R +R+R E+E+NK K +R+E++S D+
Sbjct: 242 SLDGYNTEVSVQEEQQQRLRLRLR--LRQRREQEDNKSTSNGKRKREEAESSMDK 294
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 31.5 bits (68), Expect = 0.90
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 337 KKGSHSDTDILSANEQKKRKIRKLKLDVKK-----ASQSMTRSLDFTNNDDDGSNAENTP 501
KK S +D D E+K+++ RK D+KK AS+ T D+ N GS+AE
Sbjct: 151 KKNSRNDAD-----EEKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDAEQRG 205
Query: 502 KHKLLDCKSAE 534
K L K A+
Sbjct: 206 KKLLNGDKKAK 216
>04_04_0377 -
24816834-24817049,24817128-24817174,24817262-24817406,
24818308-24818409,24818686-24818781
Length = 201
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +1
Query: 178 HSGKILS-NITYFAKTNEDRAKGSLTSRRRHNTQAEPDGALKETTA---ADHGNIITKKG 345
H+ ++ S N T+ E + K +R +A+ D ++E A A+ +
Sbjct: 43 HAARLASLNKTHTVTWEEFKKKQKEDELKRGEMEADKDKMMREYRAQLDAERAQKLALGR 102
Query: 346 SHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDGSNAENTPKHK 510
+HS + S+ ++KK K K + ++ +S + S ++++ S+ E+ K
Sbjct: 103 NHSRSKSSSSKKEKKDKDAKKRSKKRRKHRSSSESSSSSSSESSSSDDEDRDSRK 157
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +3
Query: 306 HRRRSWKHNNKKRLSLRHRHFIRERAEEEENKKIKTRRQESQ 431
H+R K +K + +H+H ++R++++E +K K + +E +
Sbjct: 134 HKRHKEKDKDKYKDQKKHKHRHKDRSKDKEKEKEKEKEKEKK 175
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Frame = +1
Query: 217 KTNEDRAKGSLTSRRRHNTQAEPDGALKETTAADHGNIITKKGSHSDTDILSANEQKKRK 396
K ++R + +L RR +E G ++ +K HSD + ++ Q+
Sbjct: 668 KLKDERKEATLERERREQELSEIKGTIEALNNQREKLQEQRKLLHSDREAITVQIQQLNV 727
Query: 397 IRKLKLDVKKASQSMTR------SLDFTNNDDDGSNAENTPKHK 510
+ +LK+D + S+ + D D+ N+ ++PK +
Sbjct: 728 LEELKIDSENKQLSLLQHDKSKLGSDINVKDNHHDNSHSSPKQR 771
>07_03_1393 - 26245105-26246862
Length = 585
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 264 TQHAGRAGWSLEGDHRRRSWKHNNKK 341
T+ AGR W +G H R WK NK+
Sbjct: 440 TEIAGRMDWDYDGLHVIRGWKAQNKQ 465
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 255 PPSTQHAGRAGWSLEGDHRRRSWKHNNKKRLSL 353
PPS QH G G H+++ ++ NN +L L
Sbjct: 806 PPSYQHRAAGGVVFPGQHQQQPYRPNNDTQLGL 838
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 303 DHRRRSWKHNNKKRLSLRHRHFIRERAEEEENKKIKTRRQESQSIDD 443
D RR+S + + KR R RH ++ ++ E+ + + RR + D+
Sbjct: 221 DERRKSVQASEHKREEKRSRHDKKDHGQDSEDDERRKRRHATSEDDE 267
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 355 DTDILSANEQKKRKIRKLKLDVKKASQSM 441
+TDI+ N+Q + +I L+L+V KA +S+
Sbjct: 586 ETDIVRLNKQSEEEISALQLEVDKAVESL 614
>01_01_0590 +
4396958-4397155,4397246-4397335,4397445-4397583,
4398125-4398243,4398492-4398559,4399409-4399457,
4399713-4400732
Length = 560
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +2
Query: 680 KKEVKMCRKVEQEPDTDSESRQSHQSRSKTRGQNEES 790
KKE K +++E+E + E+ +S + + KT+G+++ S
Sbjct: 472 KKEKKTKKEIEEEMEDAVEAAKSIEFKKKTKGRSKAS 508
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,584,963
Number of Sequences: 37544
Number of extensions: 409198
Number of successful extensions: 1549
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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