Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H18
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 117 1e-26
Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 36 0.050
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 35 0.067
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 33 0.20
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 33 0.27
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 31 0.82
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 31 1.4
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 30 1.9
Z83228-6|CAB05736.1| 241|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.3
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.3
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 29 3.3
Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical pr... 29 4.4
U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical p... 29 4.4
AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A prote... 29 4.4
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 117 bits (282), Expect = 1e-26
Identities = 73/183 (39%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Frame = +3
Query: 306 ELKNKELQNVLNTAEKEHSDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDL 485
E KEL+N+ E SD+ KYEGG KIWECT DL Y+ N+ + F K+VL+L
Sbjct: 31 ERYKKELENM------ETSDITVHKYEGGFKIWECTVDLCDYIEENQTL--FAGKSVLEL 82
Query: 486 GCGAGILGIYALQNGANVTF-QDYNKEVLENVTIPNVLVNXXXXXXXXXXXXXXXYSGDW 662
GCGA + I +GA F QD+N V+E T+PN N W
Sbjct: 83 GCGAALPSILTAVHGAKEVFAQDFNASVIEFFTLPNFEENPHSAVVQGEAMG-------W 135
Query: 663 THFNNFLPNNEQFDIILSSETIYNESNYVKIITLFKNRLNNDGSVFLAAKSVYFGVGGGT 842
N L + +FD ILSSETIYNE +Y + + +DG + AAK YFGVGG
Sbjct: 136 EEVPNRL-SGRKFDFILSSETIYNEDDYQALHDAVAATIKDDGVAWFAAKFFYFGVGGSV 194
Query: 843 KQF 851
F
Sbjct: 195 PAF 197
>Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical
protein R08D7.4 protein.
Length = 371
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Frame = +3
Query: 390 GLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGI-YALQNGANVTFQDYNKEV 566
GL +W+ + DL +I + +L+LG G G+ GI A N VT DY+ V
Sbjct: 165 GLSVWQASCDLANLFR----LIPSEYNRILELGSGCGVSGIAIAKMNDCCVTLTDYDDNV 220
Query: 567 LENVTIPNVLVN---XXXXXXXXXXXXXXXYSGDWTHFNNFLPNNEQFDIILSSETIYNE 737
L N+ N+ N S +W F +F E D+I++++ +Y+
Sbjct: 221 L-NLLEENIAKNDLKSDTEDSSANNNQATVRSLNWCDF-DFSEWKEPTDLIIAADVVYDT 278
Query: 738 SNYVKIITLFKNRLNNDGSVFLA 806
+ + + L + + +A
Sbjct: 279 ALLASLCNVLNLLLRHSKAAIVA 301
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 35.5 bits (78), Expect = 0.050
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 360 SDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGA-N 536
SD T Y + W L+ + +DK VLD+GCG G+ LQ GA
Sbjct: 3 SDFPTDPYSTAQQKWLYQDHLVLPTLEKLLKYNLKDKKVLDIGCGNGLNSTTFLQWGARK 62
Query: 537 VTFQDYNKEVLEN 575
V D ++E++EN
Sbjct: 63 VVGFDNSQEMIEN 75
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 35.1 bits (77), Expect = 0.067
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Frame = +3
Query: 459 FQDKNVLDLGCGAGILGIYALQNGA-NVTFQDYNKEVLENVTIPNVLVNXXXXXXXXXXX 635
F K+VL++G G+ +YA +NGA + +K LE P + N
Sbjct: 82 FDGKSVLEIGFVTGLPSVYAFENGAEEIAMHTMDKTSLELYCRPTLKRNNIPMIKTKVS- 140
Query: 636 XXXXYSGDWTHFNNFLPNNEQFDIILSSETI-YNESNYVKIITLFKNRLNNDGSVFLAAK 812
G FL ++FDIIL+ + + E+ + + + L+ DG + +
Sbjct: 141 -----CGTIEEAMKFL-GGKKFDIILAPDLLNRQEAEFDLVHEILHQGLSYDGICLFSCR 194
Query: 813 SVYFGVGGGTKQFEKTLEK 869
+ Y V G F + +++
Sbjct: 195 THYANVDGSLTAFLQLVKR 213
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 459 FQDKNVLDLGCGAGILGIYALQNGANVTF 545
F+DK V+D+G G GIL ++A + GA F
Sbjct: 61 FKDKVVMDVGSGTGILSMFAAKAGAKKVF 89
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 33.1 bits (72), Expect = 0.27
Identities = 34/129 (26%), Positives = 53/129 (41%)
Frame = +3
Query: 387 GGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEV 566
GG+ IW+ + Y F+ K VL+LG G G+ GI GA+V D + +
Sbjct: 31 GGV-IWDSALMTIHYFFKYPK--PFEGKKVLELGSGTGVGGIALAALGADVIITDLPERL 87
Query: 567 LENVTIPNVLVNXXXXXXXXXXXXXXXYSGDWTHFNNFLPNNEQFDIILSSETIYNESNY 746
+ NV N DWT + +P E D++L+ + +Y S
Sbjct: 88 A--LIEKNVEANRKLTGNRIKVQVL-----DWT--KDRIP--EGLDMVLAIDCVYYNSTI 136
Query: 747 VKIITLFKN 773
+ITL +
Sbjct: 137 DPLITLLND 145
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.82
Identities = 29/105 (27%), Positives = 45/105 (42%)
Frame = +3
Query: 459 FQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVLENVTIPNVLVNXXXXXXXXXXXX 638
F+ K VL+LG G G+ GI GA+V D + + + NV N
Sbjct: 13 FEGKKVLELGSGTGVGGIALAALGADVIITDLPERLA--LIEKNVEANRKLTGNRIKVQV 70
Query: 639 XXXYSGDWTHFNNFLPNNEQFDIILSSETIYNESNYVKIITLFKN 773
DWT + +P E D++L+ + +Y S +ITL +
Sbjct: 71 L-----DWT--KDRIP--EGLDMVLAIDCVYYNSTIDPLITLLND 106
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 444 KDIIEFQDKNVLDLGCGAGILGIYALQN-GANVT--FQDYNKEVLENVTIPNVLVN 602
K+I K VL++GCG+G++ + Q G NVT D N L+ VT+ +N
Sbjct: 50 KEIRSRDPKLVLEIGCGSGVVSTFVNQALGGNVTSVATDLNPHALD-VTLETAKLN 104
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 385 SYFPVTRSLCSFSAVFKTFCNSLFFSSAIILVGIICLITVSRHG 254
+Y+ + +LC+ ++ TFC +F+S ++ CL++ + HG
Sbjct: 120 NYYYLMVTLCALISLLVTFCKFVFYSDEVV---TNCLLSTALHG 160
>Z83228-6|CAB05736.1| 241|Caenorhabditis elegans Hypothetical
protein F52F12.7 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 702 DIILSSETIYNESNYVKIITLFKNRLNNDGSVFLA 806
++ E I+N+ NY+ FK+ NN+G V A
Sbjct: 34 EVFAEVEAIFNDENYLSHAGWFKDESNNEGDVVYA 68
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 264 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 437
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 438 NNK-DIIEFQDKN-VLDLGCGAGI 503
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 336 LNTAEKEHSDLVTGKYEGGLKIWECTYDL---LQYLMNNKDIIEFQDKNVLD 482
+N AE+ + K LK W+ Y QY NK IIE +D VLD
Sbjct: 229 VNVAEEVKKNAEISKIFDELKAWKWIYGKSPKFQYSRENKSIIEVKDGLVLD 280
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 264 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 437
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 438 NNK-DIIEFQDKN-VLDLGCGAGI 503
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 264 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 437
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 438 NNK-DIIEFQDKN-VLDLGCGAGI 503
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +3
Query: 264 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 437
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 349 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 407
Query: 438 NNK-DIIEFQDKN-VLDLGCGAGI 503
N + D+ D+N +L + GI
Sbjct: 408 NTRPDVYSSIDQNFILFVSANGGI 431
>Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical
protein F32A7.4 protein.
Length = 529
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 450 IIEFQDKNVLDLGCGAGILGIYALQN 527
I +FQ + VLD G GAG G +A+QN
Sbjct: 200 IPDFQPETVLDFGSGAG-AGFWAIQN 224
>U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical
protein R151.10 protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 KDDEEISWLASEE-----VKPDKQIKEVDEINL-LYLAS--LPCRETVIRHIMPTKIIAE 308
+ DE I WL +E V P++ ++ DE+ + ++ S +P E ++RH++ T +
Sbjct: 50 RHDESIRWLINELKIGDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVA 109
Query: 309 LKNKELQNVLNTAEKEHSDLV 371
L T H D V
Sbjct: 110 LCTGSCSRTFPTKLDNHKDWV 130
>AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A protein
protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 153 KDDEEISWLASEE-----VKPDKQIKEVDEINL-LYLAS--LPCRETVIRHIMPTKIIAE 308
+ DE I WL +E V P++ ++ DE+ + ++ S +P E ++RH++ T +
Sbjct: 50 RHDESIRWLINELKIGDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVA 109
Query: 309 LKNKELQNVLNTAEKEHSDLV 371
L T H D V
Sbjct: 110 LCTGSCSRTFPTKLDNHKDWV 130
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 321 ELQNVLNTAEKEHSDLVTGKYEGGLKI 401
+L NV+N+ H D+VT GLKI
Sbjct: 353 DLNNVMNSLASAHRDVVTSSAYSGLKI 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,033,162
Number of Sequences: 27780
Number of extensions: 328684
Number of successful extensions: 1046
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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