BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H17
(853 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein. 34 0.75
U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain p... 34 0.75
D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB... 34 0.75
BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box bindi... 34 0.75
BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein. 34 0.75
BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein. 34 0.75
AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box bindi... 34 0.75
AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box bindi... 34 0.75
AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box bindi... 34 0.75
AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box bindi... 34 0.75
AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box bindi... 34 0.75
AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box bindi... 34 0.75
AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box bindi... 34 0.75
AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box bindi... 34 0.75
AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, ligh... 34 0.75
AF006386-1|AAB69193.1| 257|Homo sapiens axonemal dynein light c... 34 0.75
AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens ... 33 1.7
BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein pr... 32 3.0
BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligas... 32 3.0
BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein. 32 3.0
AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein. 32 3.0
U72209-1|AAC51116.1| 180|Homo sapiens YY1-associated factor 2 p... 30 9.3
BC037777-1|AAH37777.1| 204|Homo sapiens YAF2 protein protein. 30 9.3
BC011675-1|AAH11675.1| 627|Homo sapiens coiled-coil domain cont... 30 9.3
BC000972-1|AAH00972.1| 627|Homo sapiens coiled-coil domain cont... 30 9.3
AJ005890-1|CAA06747.1| 627|Homo sapiens JM1 protein. 30 9.3
>U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein.
Length = 1154
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1053 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1107
>U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain
protein protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB6
protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1125
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1024 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1078
>BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 585 TDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKR-TEQKIDSEEI 731
+D E + K+D E+QV + ++C+ T +R S +R E+K +EEI
Sbjct: 187 SDMERKIAELETEKRDLERQVNEQKAKCEATEKRESERRQVEEKKHNEEI 236
>BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 585 TDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKR-TEQKIDSEEI 731
+D E + K+D E+QV + ++C+ T +R S +R E+K +EEI
Sbjct: 187 SDMERKIAELETEKRDLERQVNEQKAKCEATEKRESERRQVEEKKHNEEI 236
>AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1003 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1057
>AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1003 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1057
>AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1003 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1057
>AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1003 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1057
>AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 33.9 bits (74), Expect = 0.75
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K + E++++ EE+
Sbjct: 1023 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
>AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, light
intermediate chain 1 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 585 TDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKR-TEQKIDSEEI 731
+D E + K+D E+QV + ++C+ T +R S +R E+K +EEI
Sbjct: 209 SDMERKIAELETEKRDLERQVNEQKAKCEATEKRESERRQVEEKKHNEEI 258
>AF006386-1|AAB69193.1| 257|Homo sapiens axonemal dynein light
chain protein.
Length = 257
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 585 TDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKR-TEQKIDSEEI 731
+D E + K+D E+QV + ++C+ T +R S +R E+K +EEI
Sbjct: 186 SDMERKIAELETEKRDLERQVNEQKAKCEATEKRESERRQVEEKKHNEEI 235
>AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens cDNA
FLJ34159 fis, clone FCBBF3013623, highly similar to
NIL-2-A ZINC FINGER PROTEIN. ).
Length = 1104
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 567 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 731
D+ + T ED+ K ++DKE + +E EC+K E++++ EE+
Sbjct: 1003 DERESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEGEEEEEVEEEEV 1057
>BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein
protein.
Length = 1068
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 162 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKAL 341
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 342 NSE 350
N++
Sbjct: 516 NND 518
>BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligase
E3B protein.
Length = 1068
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 162 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKAL 341
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 342 NSE 350
N++
Sbjct: 516 NND 518
>BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein.
Length = 1026
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 162 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKAL 341
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 342 NSE 350
N++
Sbjct: 516 NND 518
>AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.
Length = 1068
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 162 VCRICLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKAL 341
VC IC+ + +T+ +LQI LT + + +LP L ++C +L L+ L
Sbjct: 460 VCNICVLYQTSLTTLTQIRLQI----LTGLTYLDDLLPKLWAFICELGPHGGLKLFLECL 515
Query: 342 NSE 350
N++
Sbjct: 516 NND 518
>U72209-1|AAC51116.1| 180|Homo sapiens YY1-associated factor 2
protein.
Length = 180
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +3
Query: 624 KKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS 734
KK+K+ +V +E SE + T+++ S+K+T ++ + + S
Sbjct: 75 KKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRS 111
>BC037777-1|AAH37777.1| 204|Homo sapiens YAF2 protein protein.
Length = 204
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +3
Query: 624 KKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS 734
KK+K+ +V +E SE + T+++ S+K+T ++ + + S
Sbjct: 99 KKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRS 135
>BC011675-1|AAH11675.1| 627|Homo sapiens coiled-coil domain
containing 22 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 258 ENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 437
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 438 QSKIETVEIQEVYVKKEITE 497
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
>BC000972-1|AAH00972.1| 627|Homo sapiens coiled-coil domain
containing 22 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 258 ENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 437
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 438 QSKIETVEIQEVYVKKEITE 497
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
>AJ005890-1|CAA06747.1| 627|Homo sapiens JM1 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 258 ENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLS 437
E H +PLL Y RKLQ+C EL +E + EL +S E+ ++ L+S
Sbjct: 422 EKHRVPLLAEYRHLRKLQDCRELESSRRLAE--IQELHQSVRAAAEEARRKEEVYKQLMS 479
Query: 438 QSKIETVEIQEVYVKKEITE 497
+ + ++ + + I E
Sbjct: 480 ELETLPRDVSRLAYTQRILE 499
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,680,071
Number of Sequences: 237096
Number of extensions: 1506000
Number of successful extensions: 4726
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4712
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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