Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H16
(984 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 44 3e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 36 0.009
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.25
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.25
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.25
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.33
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.1
SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces po... 27 4.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.4
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 7.1
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 26 9.4
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 44.0 bits (99), Expect = 3e-05
Identities = 32/87 (36%), Positives = 34/87 (39%)
Frame = -1
Query: 978 RGEXGGVWGXXRPXXGGRXAXXXGXGEXXPXGGAXGXGPHXSPQGGERPARGXRENGXGS 799
RG GG +G GG G G GG G G H GG G E G G
Sbjct: 183 RGHNGGGFGGF---GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 798 XXGGXPXGGFXGGETXXDFXXGGGGWG 718
GG GGF GG F G GG+G
Sbjct: 240 FGGG--PGGFGGG--LGGFGGGPGGFG 262
Score = 31.1 bits (67), Expect = 0.25
Identities = 29/81 (35%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = -1
Query: 909 GXGEXXPXGGAXGXGPHXSPQGGERPARGXRENGXGSXXGGXPXGGFXGGETXXDFXXG- 733
G G P G G G GGE G G G GG GGF GG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGG-FGGE----GHHHGGHGGFGGGP--GGFEGGPGGFGGGPGG 246
Query: 732 -GGGWGX*GXEGXXF*CSPGG 673
GGG G G F PGG
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGG 267
Score = 27.1 bits (57), Expect = 4.1
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -1
Query: 861 HXSPQGGERPARGXRENGXGSXXGGXPXGGFXGGETXXDFXXGGGGWGX*GXEG--XXF* 688
H GG G G GG G GGE GG G G G EG F
Sbjct: 182 HRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Query: 687 CSPGG 673
PGG
Sbjct: 242 GGPGG 246
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.3 bits (90), Expect = 4e-04
Identities = 24/81 (29%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Frame = +1
Query: 730 PPXXKIPXRFPPXKXPXGAPPXXRPXXVFPG--SPGRPFPPLGGXVGXXPXCPPXGXXFP 903
PP K PP P GAPP +P P +P PP+ P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 904 XSPXXGGXXPPXXPXXPPNPP 966
G P P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVP 1220
Score = 35.5 bits (78), Expect = 0.012
Identities = 28/94 (29%), Positives = 31/94 (32%), Gaps = 11/94 (11%)
Frame = +1
Query: 730 PPXXKIPXRFPPXKXPXGAPPXXRPXXVFP------GSPGRP-----FPPLGGXVGXXPX 876
PP K PP P GAPP +P P G+P P PP+ G P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG-APP 1160
Query: 877 CPPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFPP 978
P P P PP PP PP
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 33.5 bits (73), Expect = 0.047
Identities = 34/129 (26%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Frame = +2
Query: 569 PXXGDTPGXXXXXGGXXXXPXRXXAPXXAFSXXXRPPGEHQKXXPSX-P*XPXPP---PP 736
P TP G P AP P G PS P P P PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 737 XXKSXXVSPPXXPPXGXPPXSDPXPFSRXPRAGLSXXXXXXXXXXXXAPPXGXXS---PX 907
K PP P G PP P P P + APP S P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPV--PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 908 PXXXAXRPP 934
P PP
Sbjct: 1162 PKPSVAAPP 1170
Score = 32.7 bits (71), Expect = 0.082
Identities = 27/103 (26%), Positives = 31/103 (30%), Gaps = 3/103 (2%)
Frame = +1
Query: 682 RASKXXPLXSLXAPXPPPXXKI---PXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLG 852
+AS P P P P I P PP P AP +P P +P PP+
Sbjct: 957 KASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP-LSKPVSTSPAAPLARVPPVP 1015
Query: 853 GXVGXXPXCPPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFPPG 981
P P P P P P P P G
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG 1058
Score = 32.7 bits (71), Expect = 0.082
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Frame = +1
Query: 685 ASKXXPLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVG 864
+SK P+ A PP +P PP P PP + G+P P PP+
Sbjct: 1018 SSKAPPVPLPSADAPP--IPVPSTAPPVPIPTSTPPVPKSS---SGAPSAP-PPVPAPSS 1071
Query: 865 XXPXCP-PXGXXFPXSPXXGGXXPPXXP--XXPPNP 963
P P P G P P G P P PP P
Sbjct: 1072 EIPSIPAPSGA--PPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 29.5 bits (63), Expect = 0.76
Identities = 25/93 (26%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Frame = +2
Query: 530 PXXPPPRGXXRFP-PXXGDTPGXXXXXGGXXXXPXRXXAPXXAFSXXXRPPGEHQKXXPS 706
P P P G P P P P P A S P + P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 707 XP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDP 805
P P PP K PP PP PP P
Sbjct: 1191 VP-PPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.5 bits (63), Expect = 0.76
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 730 PPXXKIPXRFPPXKXPXGAPPXXRP-XXVFPGSPGRPFPPLGGXVGXXPXCPPXGXXFPX 906
PP K PP P APP +P V P P PP+ P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 907 SPXXGGXXP 933
P P
Sbjct: 1239 VPAPSSEAP 1247
Score = 28.7 bits (61), Expect = 1.3
Identities = 26/104 (25%), Positives = 28/104 (26%), Gaps = 10/104 (9%)
Frame = +1
Query: 700 PLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSP---GRP-------FPPL 849
P+ S P P P P P PP P P P G P PP+
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 850 GGXVGXXPXCPPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFPPG 981
P P P P G P P P P G
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/92 (23%), Positives = 23/92 (25%)
Frame = +2
Query: 530 PXXPPPRGXXRFPPXXGDTPGXXXXXGGXXXXPXRXXAPXXAFSXXXRPPGEHQKXXPSX 709
P P P G P P G AP P + P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 710 P*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDP 805
P PP K PP PP PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.9 bits (59), Expect = 2.3
Identities = 31/148 (20%), Positives = 32/148 (21%), Gaps = 3/148 (2%)
Frame = +2
Query: 530 PXXPPPRGXXRFPPXXGDTPGXXXXXGGXXXXPXRXXAPXXAFSXXXRPPGEHQKXXPSX 709
P P P G P P P AP PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 710 P*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDP---XPFSRXPRAGLSXXXXXXXXXXXXA 880
P PP P P PP P P P AG+
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 881 PPXGXXSPXPXXXAXRPPXXGLXFPQTP 964
P G P A P P P
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/81 (23%), Positives = 22/81 (27%)
Frame = +1
Query: 721 PXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVGXXPXCPPXGXXF 900
P PPP P P P PP P +P PP+ P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPV---PTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 901 PXSPXXGGXXPPXXPXXPPNP 963
P P P+P
Sbjct: 1247 PSVSTPRSSVPSPHSNASPSP 1267
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.009
Identities = 42/152 (27%), Positives = 45/152 (29%), Gaps = 3/152 (1%)
Frame = +2
Query: 530 PXXPPPRGXXRFPPXXGDTPGXXXXXGGXXXXPXRXXAPXXAFSXXXRPPGEHQKXXP-- 703
P PPP R P G+ G P R A A S P G P
Sbjct: 312 PPPPPPSRRNRGKPPIGN--GSSNSSLPPPPPPPRSNA---AGSIPLPPQGRSAPPPPPP 366
Query: 704 -SXP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDPXPFSRXPRAGLSXXXXXXXXXXXXA 880
S P PPP S VS P PP P S P + P S
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP---ALPPLGNASRTSTPPVPTPPSL 423
Query: 881 PPXGXXSPXPXXXAXRPPXXGLXFPQTPPXSP 976
PP S P PP + P PP P
Sbjct: 424 PP----SAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 35.9 bits (79), Expect = 0.009
Identities = 30/98 (30%), Positives = 33/98 (33%), Gaps = 12/98 (12%)
Frame = +1
Query: 721 PXPPPXXKIPXRFPPXKXPXG------APPXXRPXXVFPGSP------GRPFPPLGGXVG 864
P PPP IP R P P G PP P + P +P P P+G
Sbjct: 389 PAPPPA--IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 865 XXPXCPPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFPP 978
P PP P P PP P P PP P
Sbjct: 447 --PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 32.7 bits (71), Expect = 0.082
Identities = 26/92 (28%), Positives = 28/92 (30%)
Frame = +1
Query: 700 PLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVGXXPXC 879
PL + PP P PP P PP P P PP P
Sbjct: 405 PLGNASRTSTPPVPT-PPSLPP-SAPPSLPPSAPPSLPMGAPAAPPLPP------SAPIA 456
Query: 880 PPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFP 975
PP P +P PP P PP P P
Sbjct: 457 PPLPAGMPAAP----PLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 7.1
Identities = 21/86 (24%), Positives = 22/86 (25%)
Frame = +2
Query: 719 PXPPPPXXKSXXVSPPXXPPXGXPPXSDPXPFSRXPRAGLSXXXXXXXXXXXXAPPXGXX 898
P PPPP + PP P P R AG APP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG----SIPLPPQGRSAPPPPPP 366
Query: 899 SPXPXXXAXRPPXXGLXFPQTPPXSP 976
P PP PP P
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 703 LXSLXAPXPPPXXKIPXRFPPXKXPXGA-PPXXRP--XXVFPGSPGRPFP-PLGG 855
L + AP PPP +P PP P A PP P G+PG P P PL G
Sbjct: 1876 LSNQAAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTG 1930
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.25
Identities = 27/100 (27%), Positives = 30/100 (30%)
Frame = +2
Query: 674 PPGEHQKXXPSXP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDPXPFSRXPRAGLSXXXX 853
PP P+ P P PP S + P PP PP P S+ P A S
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP-----PLSQAPVANTSSRPS 219
Query: 854 XXXXXXXXAPPXGXXSPXPXXXAXRPPXXGLXFPQTPPXS 973
AP S P P P PP S
Sbjct: 220 SFAPPAGHAP--NVTSESPKFPNRGPSIPSASVPPVPPSS 257
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/84 (29%), Positives = 28/84 (33%)
Frame = +1
Query: 727 PPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVGXXPXCPPXGXXFPX 906
PP P + P APP RP + P SP PP+ P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPP--RPS-IPPPSPASA-PPIPSKAPPIPSSLPP----PA 175
Query: 907 SPXXGGXXPPXXPXXPPNPPXFPP 978
P PP P P P PP
Sbjct: 176 QPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 700 PLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVGXXPXC 879
P S+ P P IP + PP P PP +P P P P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLP-SAVPPMPPKV 201
Query: 880 PP 885
PP
Sbjct: 202 PP 203
Score = 25.8 bits (54), Expect = 9.4
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = +2
Query: 674 PPGEHQKXXP--SXP*XPXPPPPXXKSXXVSPPXXP--PXGXPPXSDP-XPFSRXPRA 832
PP + P S P P PPP S P P P PP + P P P A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.25
Identities = 22/58 (37%), Positives = 23/58 (39%)
Frame = -1
Query: 933 GGRXAXXXGXGEXXPXGGAXGXGPHXSPQGGERPARGXRENGXGSXXGGXPXGGFXGG 760
GGR G G G G G + GG ARG R G G GG GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR-GGRGGARGG--RGGSSGG 63
Score = 28.3 bits (60), Expect = 1.8
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -1
Query: 978 RGEXGGVWGXXRPXXGGRXAXXXGXGEXXPXGGAXGXGPHXSPQGGERPARGXRENGXGS 799
RG GG G GGR G G GG G G +GG ARG R G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGF--GGGRGGARGG--GRGGARGGRGGRGGARGGRGGSSGG 63
Query: 798 XXG 790
G
Sbjct: 64 RGG 66
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.25
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +1
Query: 721 PXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLGGXVGXXPXCPP 885
P PPP +P P P PP P + G P P PP G G P PP
Sbjct: 733 PPPPPAVIVPT---PAPAPIPVPP---PAPIMGGPPPPPPPP--GVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +1
Query: 784 APPXXRPXXVFPG-SPGR-PFPPLGGXVGXXPXCPPXGXXFPXSPXXGGXXPPXXPXXPP 957
+PP P + P +P P PP +G P PP P P G PP P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PP-----PPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 835 PFPPLGGXVGXXPXCPPXGXXFPXSPXXGGXXPPXXP-----XXPPNPPXFPP 978
P PP + P P P +P GG PP P PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 674 PPGEHQKXXPSXP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDPXP 811
PP P+ P P PP PP PP G P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 688 SKXXPLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPP 846
S P ++ P P P IP PP G PP P V P P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAP-IPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.33
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 674 PPGEHQKXXPSXP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDPXP 811
PP Q P P PPPP PP PP P S P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 677 PGEHQKXXPSXP*XPXPPPPXXKSXXVSPPXXPPXGXPPXSDP 805
P + P P PPPP PP PP P S P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +1
Query: 688 SKXXPLXSLXAPXPPPXXKIPXRFPPXKXPXGAPPXXRPXXVFPGSPGRPFPPLG 852
S P S P PPP +P PP P A P P P S P G
Sbjct: 1696 SAAPPQMSAPTPPPPPM-SVPP--PPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +1
Query: 880 PPXGXXFPXSPXXGGXXPPXXPXXPPNPPXFPP 978
P P P PP P P PP PP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 701 PSXP*XPXPPPPXXKSXXVS-PPXXPPXGXPPXSDPXPFSRXP 826
P P P P P + +S PP PP P P PF P
Sbjct: 501 PGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYP 543
>SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 163
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 731 PPXXKSXXVSPPXXPPXGXPPXSDPXPFSR 820
P K+ +SPP PP G P + P S+
Sbjct: 88 PKFEKNWLISPPGSPPVGWEPIVEESPNSQ 117
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 719 PXPPPPXXKSXXVSPPXXPPXG 784
P PPPP PP PP G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 931 PPXXPXXPPNPPXFPP 978
PP P PP PP F P
Sbjct: 5 PPGNPPPPPPPPGFEP 20
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 719 PXPPPPXXKSXXVSPPXXPPXGXPP 793
P PPP PP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.4
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = +1
Query: 700 PLXSLXAPXP----PPXXKIPXRF-PPXKXPXGAPPXXRPXXVFPGSPGRPFPPL--GGX 858
P S+ A P PP K+ + PP PP +P P +P P P+
Sbjct: 912 PTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASR 971
Query: 859 VGXXPXCPPXGXXFP 903
+ P PP P
Sbjct: 972 ISSSPNMPPSNPYTP 986
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 882 GAXGXGPHXSPQGGERPARGXRENGXGSXXGGXPXGGFXGG 760
G G G +GG +RG GG GGF GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -1
Query: 810 GXGSXXGGXPXGGFXGGE-TXXDFXXGGG 727
G GG P GGF GG F GGG
Sbjct: 438 GGSFPGGGFPGGGFPGGSYNSQGFGMGGG 466
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 96 ILLETKK*IEXXKKXKXKDKKKK 164
I+LETK I KK K KKKK
Sbjct: 811 IVLETKSPIRVEKKKSKKKKKKK 833
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,022,297
Number of Sequences: 5004
Number of extensions: 25682
Number of successful extensions: 180
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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