Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H13
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 190 1e-48
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 190 1e-48
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 190 1e-48
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 190 1e-48
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 40 0.002
AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical... 35 0.086
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 28 7.5
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 7.5
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 190 bits (463), Expect = 1e-48
Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = +1
Query: 298 FEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGG 477
+E K+LYE+SDD +RKE+LDD +FM + G P+ R+PIMAK VLDLYELY LV+ GG
Sbjct: 168 YEEQFKQLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGG 227
Query: 478 LVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEG 657
LVE+INKKLW+EI KGL LPSSITSAAFTLRTQY KYLYDYECEK+ LS +S+L AI+G
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKLSNQSDLQQAIDG 287
Query: 658 NKRE--GRRASGQY 693
N+RE GRR + +
Sbjct: 288 NRREAPGRRTAPSF 301
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 190 bits (463), Expect = 1e-48
Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = +1
Query: 298 FEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGG 477
+E K+LYE+SDD +RKE+LDD +FM + G P+ R+PIMAK VLDLYELY LV+ GG
Sbjct: 168 YEEQFKQLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGG 227
Query: 478 LVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEG 657
LVE+INKKLW+EI KGL LPSSITSAAFTLRTQY KYLYDYECEK+ LS +S+L AI+G
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKLSNQSDLQQAIDG 287
Query: 658 NKRE--GRRASGQY 693
N+RE GRR + +
Sbjct: 288 NRREAPGRRTAPSF 301
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 190 bits (463), Expect = 1e-48
Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = +1
Query: 298 FEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGG 477
+E K+LYE+SDD +RKE+LDD +FM + G P+ R+PIMAK VLDLYELY LV+ GG
Sbjct: 168 YEEQFKQLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGG 227
Query: 478 LVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEG 657
LVE+INKKLW+EI KGL LPSSITSAAFTLRTQY KYLYDYECEK+ LS +S+L AI+G
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKLSNQSDLQQAIDG 287
Query: 658 NKRE--GRRASGQY 693
N+RE GRR + +
Sbjct: 288 NRREAPGRRTAPSF 301
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 190 bits (463), Expect = 1e-48
Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Frame = +1
Query: 298 FEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGG 477
+E K+LYE+SDD +RKE+LDD +FM + G P+ R+PIMAK VLDLYELY LV+ GG
Sbjct: 168 YEEQFKQLYELSDDVKRKEWLDDWLNFMHRIGKPVTRIPIMAKQVLDLYELYRLVVQHGG 227
Query: 478 LVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEG 657
LVE+INKKLW+EI KGL LPSSITSAAFTLRTQY KYLYDYECEK+ LS +S+L AI+G
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKEKLSNQSDLQQAIDG 287
Query: 658 NKRE--GRRASGQY 693
N+RE GRR + +
Sbjct: 288 NRREAPGRRTAPSF 301
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +1
Query: 343 QRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIK 522
+R+ F + L F + G P+ +P ++K +DL+ LY V A+GG +V K W+ +
Sbjct: 301 ERRGFFERLIEFCEHNGEPLTMVPQVSKQSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCT 360
Query: 523 GLRLPSSITSAA-FTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDA 699
+ +SAA + LR Y ++L EC + + E+ A + KR+ +R +A
Sbjct: 361 EANPDLAESSAAGYQLRKHYQRHLLMLECRETGRNPEDEV-AFADKMKRQRKREPAGGNA 419
Query: 700 QAALAMPPLNRGVRAS 747
AA A+ +G + S
Sbjct: 420 AAAAAVAAAQQGDQKS 435
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +1
Query: 325 EISDDP--QRK--EFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVI 492
+++D P QRK EF + L F ++R +LP + ++LY LY+ V+A GG +V
Sbjct: 16 KLTDPPEKQRKMAEFYNSLRMFYKRRWNATLKLPHVQGVEVNLYRLYDTVMALGGWQKVA 75
Query: 493 NKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAI--EGNKR 666
W +I + I ++ YM+YL +E + T ++D + E ++
Sbjct: 76 ASDKWSDIAEMFGCKDDILCGDHAIKIIYMRYLSKFE----QVETIGDVDDYVDNEMSRS 131
Query: 667 EGRRAS 684
GR A+
Sbjct: 132 RGRNAT 137
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 7/141 (4%)
Frame = +1
Query: 289 PNFFEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIA 468
PN + D + D + F+ L F + I+ P + +DLY LY L
Sbjct: 668 PNESDYDSDATIKNVDAETKDLFVAMLVQFHDAHNSVIDTNPTIQGHEVDLYYLYELAKK 727
Query: 469 RGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDY-------ECEKKNLST 627
GG +V LW + K +L + T A L+T + +L Y ++L
Sbjct: 728 TGGPKKVYAANLWSDYAK--KLVPAATDAEEELKTIFKNFLESYLAINTKLSWPMESLQP 785
Query: 628 RSELDAAIEGNKREGRRASGQ 690
R+E + G E R+ Q
Sbjct: 786 RTERKVVLPGQYSESRKKRTQ 806
>AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical
protein Y82E9BR.2 protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.086
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 337 DPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVIN 495
DPQR EFL D+ M + G L S++++ L V RGG ++ IN
Sbjct: 21 DPQRPEFLRDMIDHMAQHGANAIMLVSFQNSLINITMLSPFVEPRGGWLQWIN 73
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 32.7 bits (71), Expect = 0.35
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Frame = +1
Query: 298 FEVDKKKLYEISDDPQRKE-FLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARG 474
F +KL E+ + K F+D L +F + G +++DLY L+ +V G
Sbjct: 107 FRPRTQKLNEVEAIVKEKHTFIDRLINFNRYSGLTFEFPVDRDGNIVDLYRLHRIVQNFG 166
Query: 475 GLVEVINKKLWQEIIKGL----RLPSSITSAAFTL-RTQYMKYL--YDYECEKKNLSTRS 633
G EV + W+++ + ++ + SA L R+ Y ++ ++ ++K +
Sbjct: 167 GCEEVNEDEKWRDVAREYLPKEQMARGVPSAFINLIRSHYNLHIEPFNRNLKEKAMKNDD 226
Query: 634 ELDAAIEGNKREGRRASG 687
E D +E K + + G
Sbjct: 227 ESDDEMEELKHKYQHHHG 244
>Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical
protein Y57G11C.4 protein.
Length = 224
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 469 RGGLVEVINKKLWQ--EIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELD 642
R G V+ I K L + +++ + L + T RT+Y + Y+ +KK L T EL+
Sbjct: 40 RAGAVQEIRKSLEEVNDLLDQMELVVRELESNTTERTKYELRVRSYQSDKKQLDT--ELE 97
Query: 643 AAIEGNKREGRR 678
AI+ + E R
Sbjct: 98 KAIKRVREEADR 109
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 43 LSLYRMLARVXRLACGHTLTQCTCLLSHIWNFALSFGGDRLYCFCVIVKYI 195
L LY + L CG + CT LL+H++++ +S L C + ++
Sbjct: 670 LMLYTFSGPILFL-CGCNASSCTSLLNHLFSYRISSMCTSLICLYIFQNHL 719
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 532 LPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAAL 711
LP+ T + LR Y + L Y+ E K L + + +D E RRA + A
Sbjct: 483 LPAGYTVHNWQLRPDYDELLRKYKKETKLLRSDTRIDFYQEREFNHARRAEWPHCAVCQY 542
Query: 712 AMPP 723
PP
Sbjct: 543 FQPP 546
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 160 GHRQMTMQSSRCATVNTCTALKCGHKPDXLLLPTSDINSKLKECPIVSR 14
GH++ + C V+ C + CG D L +PT+ + K CP + R
Sbjct: 918 GHKKDKRGCATCDCVDPCEGVTCG--IDSLCVPTT-VPCVTKPCPTIPR 963
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,662
Number of Sequences: 27780
Number of extensions: 352518
Number of successful extensions: 887
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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