Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_H09
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162...    29   6.6  

>11_01_0207 -
           1620192-1620280,1620408-1620451,1620703-1620791,
           1620870-1620914,1621441-1621548,1621638-1621723,
           1622202-1622289,1622403-1622576,1623084-1623159,
           1623256-1623305,1623392-1623454,1623689-1623791,
           1623871-1623973,1624679-1624739,1624864-1624904,
           1625076-1625154
          Length = 432

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 873 QCLAVFVLGLKVYFFGPIA*EKSLTGALNA*KLSSVRSFAVSATFFFVTHV 721
           Q LAV   GL VY            G++N+ +++S  S  + AT+ F+TH+
Sbjct: 274 QVLAVAGAGLLVYQLFIYRSVHKFLGSINSSRIASALSVPILATYPFMTHL 324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,744,832
Number of Sequences: 37544
Number of extensions: 392016
Number of successful extensions: 887
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)