Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_H07
         (872 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 161  HSNNLTAFTVQRCFILVISPIFSQCNGLSFGF 66
            H    T  T Q   I  +SP  S  NG+  G+
Sbjct: 1086 HDTTCTTLTSQTIRISWMSPPLSAANGVITGY 1117


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  NPNDKPLHWENIGEITKIK 123
           NPN+K LH+ +I    KI+
Sbjct: 516 NPNEKSLHYLHIAGPGKIQ 534


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  NPNDKPLHWENIGEITKIK 123
           NPN+K LH+ +I    KI+
Sbjct: 516 NPNEKSLHYLHIAGPGKIQ 534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,674
Number of Sequences: 438
Number of extensions: 4864
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)