Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_H06
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28150-1|AAB00541.1|  288|Homo sapiens adrenoleukodystrophy rela...    50   1e-05
BC104903-1|AAI04904.1|  740|Homo sapiens ATP-binding cassette, s...    50   1e-05
BC104901-1|AAI04902.1|  740|Homo sapiens ATP-binding cassette, s...    50   1e-05
AJ000327-1|CAA03994.1|  740|Homo sapiens adrenoleukodystrophy re...    50   1e-05
AF119831-1|AAD30439.1|  740|Homo sapiens adrenoleukodystrophy-re...    50   1e-05
BC025358-1|AAH25358.1|  745|Homo sapiens ATP-binding cassette, s...    48   3e-05
BC015541-1|AAH15541.1|  745|Homo sapiens ATP-binding cassette, s...    48   3e-05
Z31348-1|CAA83230.1|  745|Homo sapiens adrenoleukodystropy protein.    47   1e-04
Z21876-1|CAA79922.1|  745|Homo sapiens ALD protein (ALDP) protein.     47   1e-04

>U28150-1|AAB00541.1|  288|Homo sapiens adrenoleukodystrophy related
           protein protein.
          Length = 288

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E   L  H++ L SRTFLSIYVA L+G IVK IV+K  R+F
Sbjct: 91  ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTF 131


>BC104903-1|AAI04904.1|  740|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 2 protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E   L  H++ L SRTFLSIYVA L+G IVK IV+K  R+F
Sbjct: 103 ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTF 143


>BC104901-1|AAI04902.1|  740|Homo sapiens ATP-binding cassette,
           sub-family D, member 2 protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E   L  H++ L SRTFLSIYVA L+G IVK IV+K  R+F
Sbjct: 103 ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTF 143


>AJ000327-1|CAA03994.1|  740|Homo sapiens adrenoleukodystrophy
           related protein protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E   L  H++ L SRTFLSIYVA L+G IVK IV+K  R+F
Sbjct: 103 ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTF 143


>AF119831-1|AAD30439.1|  740|Homo sapiens
           adrenoleukodystrophy-related protein protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E   L  H++ L SRTFLSIYVA L+G IVK IV+K  R+F
Sbjct: 103 ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTF 143


>BC025358-1|AAH25358.1|  745|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 1 protein.
          Length = 745

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E  LL  H+  L SRTFLS+YVA L+G + + IV+KD R+F
Sbjct: 90  ETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAF 130


>BC015541-1|AAH15541.1|  745|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 1 protein.
          Length = 745

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E  LL  H+  L SRTFLS+YVA L+G + + IV+KD R+F
Sbjct: 90  ETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAF 130


>Z31348-1|CAA83230.1|  745|Homo sapiens adrenoleukodystropy protein.
          Length = 745

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E  LL  H+  L SRTFLS+YVA L+G + + I +KD R+F
Sbjct: 90  ETGLLALHSAALVSRTFLSVYVARLDGRLARCIARKDPRAF 130


>Z21876-1|CAA79922.1|  745|Homo sapiens ALD protein (ALDP) protein.
          Length = 745

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +2

Query: 734 EVALLTAHTLCLFSRTFLSIYVASLEGSIVKHIVQKDMRSF 856
           E  LL  H+  L SRTFLS+YVA L+G + + I +KD R+F
Sbjct: 90  ETGLLALHSAALVSRTFLSVYVARLDGRLARCIARKDPRAF 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,810,778
Number of Sequences: 237096
Number of extensions: 2067769
Number of successful extensions: 8690
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8673
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)