Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_H05
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical pr...    69   4e-12
AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical...    31   1.1  
AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and...    31   1.1  
U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z82256-1|CAB05113.1|  627|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical
           protein F21C3.3 protein.
          Length = 130

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 28/42 (66%), Positives = 37/42 (88%)
 Frame = +1

Query: 109 DTIFGKILRKEIPANFIYEDEQCVAFNDVNPQAPTHVLVIPR 234
           DT+FGKI+RKEIPA  I+ED++ +AF+DV+PQAP H LVIP+
Sbjct: 20  DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPK 61



 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 23/29 (79%), Positives = 29/29 (100%)
 Frame = +3

Query: 360 VNDGKNGAQSVYHLHIHILGGRQMQWPPG 446
           VN+GK+GAQSV+HLH+H+LGGRQ+QWPPG
Sbjct: 102 VNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130



 Score = 31.5 bits (68), Expect = 0.80
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 242 IPQLSLADDTDEQLLGHLLIVARKVAAQVGLDKTGFRL 355
           I  L  A D+D  L+G L++ A KVA Q+G+   G+R+
Sbjct: 64  IDMLENAVDSDAALIGKLMVTASKVAKQLGM-ANGYRV 100


>AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical
           protein Y56A3A.13 protein.
          Length = 440

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 360 VNDGKNGAQSVYHLHIHILGGR 425
           V DGK+  Q+V H+HIHIL  R
Sbjct: 378 VQDGKDAGQTVPHVHIHILPRR 399


>AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and
           fragile histidinetriad fusion protein NitFhit protein.
          Length = 440

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 360 VNDGKNGAQSVYHLHIHILGGR 425
           V DGK+  Q+V H+HIHIL  R
Sbjct: 378 VQDGKDAGQTVPHVHIHILPRR 399


>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 163 EDEQCVAFNDVNPQAPTHVLVIPR 234
           E++ CV  ND+ P+A  H LV+ +
Sbjct: 27  ENKSCVVINDIKPKAKNHYLVLSK 50


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 242  IPQLSLADDTDEQLLGHLLIVARKVAAQV 328
            +PQL + +DTDE  L  LL+   K AA V
Sbjct: 1123 LPQLDVDEDTDEYRLRRLLLFGLKPAANV 1151


>Z82256-1|CAB05113.1|  627|Caenorhabditis elegans Hypothetical
           protein B0513.1 protein.
          Length = 627

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 692 FEVSPGR--IPLTDNLPGVNYIEFLKRHHQEKSL 787
           F + P R  + +  NLP  +Y+ F+K+H QE  +
Sbjct: 341 FALFPNRTYVSVRRNLPNYDYVGFIKQHFQEMDI 374


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,434,272
Number of Sequences: 27780
Number of extensions: 362097
Number of successful extensions: 732
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)