Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H04
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0080 + 587674-588510 36 0.059
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.10
12_02_0640 - 21447470-21448309 31 1.7
12_02_0635 - 21430245-21431156 31 1.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.7
01_01_0083 + 631196-631675 30 2.2
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.9
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 3.9
12_02_1174 - 26696869-26698191 29 5.1
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 5.1
07_03_0600 + 19866757-19867218,19867920-19868429 29 5.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.1
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 29 6.7
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 29 6.7
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 6.7
01_01_0401 + 3043634-3043894,3045610-3045849 29 6.7
11_06_0610 - 25449085-25453284 28 8.9
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 8.9
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 28 8.9
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 8.9
03_01_0515 - 3864796-3865425 28 8.9
>07_01_0080 + 587674-588510
Length = 278
Score = 35.5 bits (78), Expect = 0.059
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 420 PPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXETXPP 545
PP GG G P PP P G P PPP PP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P PRG GG P P P G P PP G PP G G
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRGVVG 1237
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -1
Query: 559 PPXFRGGXVSXXGGGXXGPXXXXPXPRGXGGXFLGXXPXPP----PPXPGG 419
P FRGG G P P PRG GG +G P PP PP P G
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPP--PPPRGHGG--VGGPPTPPGAPAPPMPPG 1212
>12_02_0640 - 21447470-21448309
Length = 279
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 754 PPXXXKKK---NRXXXXXTXPXEXX-GP-PPXKXXKTPPPXPGXXPXPA 885
PP KKK +R T P E P PP +TPPP PG PA
Sbjct: 193 PPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPGSPKKPA 241
>12_02_0635 - 21430245-21431156
Length = 303
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +1
Query: 754 PPXXXKKK---NRXXXXXTXPXEXX-GP-PPXKXXKTPPPXPGXXPXPA 885
PP KKK +R T P E P PP +TPPP PG PA
Sbjct: 190 PPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPGSPKKPA 238
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 777 KPXXXPXNXPXGXGGXPSXXTKXNPPXXPXXEXPPCXFXPNPP 905
KP P P G GG P PP P PP PN P
Sbjct: 249 KPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPP---PPNAP 288
>01_01_0083 + 631196-631675
Length = 159
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 420 PPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXETXP 542
PP GGGG G P PP G G PPP P
Sbjct: 78 PPPQGGGG-GYIPYYQPPAGGGGGGGGFNYPAPPPPNPIVP 117
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 754 PPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
PP K P PPP K PPP G P P +P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 754 PPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
PP K P PPP PPP P P P + P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -3
Query: 557 PPXSGGPXFPXXGGGXGXXXXXPXXP--GXXGXXFGXXPXXPPPXPR 423
PP SG P GGG G P P G G P PP P+
Sbjct: 17 PPYSGRGDVPGRGGGGGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQ 63
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 754 PPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXP 882
PP + + R P PPP PPP P P P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRP 167
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 823 PPPXKXXKTPPPXPGXXPXP 882
PPP + PPP PG P P
Sbjct: 38 PPPPRRRTPPPPPPGSGPGP 57
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/88 (25%), Positives = 27/88 (30%)
Frame = +2
Query: 476 PPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXXXXXGXXXPXXXKXXP*KXFFKXXPPP 655
PP PPP + APP G + P + P + PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQ----PYCQQQQPLPPHYYQAGPP 59
Query: 656 XKKQKXXPXFXSXQNPPPP*KXKKXPPQ 739
P Q PPPP + PPQ
Sbjct: 60 HAPPPQQPPAMWGQPPPPPPQYAPPPPQ 87
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Frame = +3
Query: 423 PGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXET-------XPPRXXGGXRXK 572
P G G G P P P GP PPP PP GG R +
Sbjct: 340 PSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRAR 396
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 391 GXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPP 546
G P P P G G G P P P P P GPP
Sbjct: 299 GHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPP 350
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXX 594
P P G G G P P P P PPP G G G P
Sbjct: 338 PSPSAAGAGS-GPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRAR 396
Query: 595 XXPKXXKXP 621
P K P
Sbjct: 397 GPPPFKKSP 405
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 206 PKKKPXPGXGXXPTRGXXXKKKKKKKXXRXPXXXXKXKKXXKK 334
P P RG KKKKKKK + K KK KK
Sbjct: 10 PHSAPPAEPAKGGLRGLPKKKKKKKKKKKKKKKKKKKKKKKKK 52
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 334 FFXXFFXFXXXXXXPXXFFFFFFFXXXPPC 245
FF FF F FFFFFFF C
Sbjct: 62 FFFFFFFFFFFFFFFFFFFFFFFFFDRASC 91
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 400 PXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGG 558
P F P G G PG G P PPP GPP GG
Sbjct: 201 PRGFPPPLPSPGAGAPRGGSATPAMIPGHPGAFY--PFPPPSLPGVGPPRGGG 251
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 419 PPGGXGGGXXAXXQKXXPXPP 481
PPGG GGG Q P PP
Sbjct: 19 PPGGGGGGGKKLHQSPPPSPP 39
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 754 PPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQ-TP 903
PP +K T P PP ++ PP P P P H+ TP
Sbjct: 782 PPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTP 832
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +3
Query: 399 PXXFXXXPPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXETXPP 545
P + PPG P+ P P G G PPP PP
Sbjct: 717 PPVYAPYPPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPP 765
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +1
Query: 400 PXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPP 546
P + P P G P+ P PG G PP GPP
Sbjct: 717 PPVYAPYPPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPP 765
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -1
Query: 505 PXXXXPXPR-GXGGXFLGXXPXPPPPXP 425
P P P G GG G P PPPP P
Sbjct: 24 PCPLPPIPSCGGGGGGAGPTPPPPPPPP 51
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 647 PPPXKKQKXXPXFXSXQNPPPP*KXKKXPP 736
PPP P S NPPPP + PP
Sbjct: 439 PPPYASYPPPPPGSSMYNPPPPAPGQATPP 468
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 805 PXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P PPP +PPP P P P+ +P
Sbjct: 84 PPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.153 0.533
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,065,295
Number of Sequences: 37544
Number of extensions: 402334
Number of successful extensions: 2514
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -