Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H04
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 34 0.12
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.28
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.28
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.49
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.49
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.49
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.86
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 0.86
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.86
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 0.86
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 31 1.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.0
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 2.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 2.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 2.6
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.6
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 4.6
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 4.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.6
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 4.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 6.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.0
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.0
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 8.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 8.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.0
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGK 570
P G G G PK P PG G P P G GPP GG G+
Sbjct: 145 PVGPAGPAGGPGPKGPPGPPGGHGE----PGPAGRGGPRGPPGPGGPQGE 190
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = -3
Query: 557 PPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKPXXXP 378
PP +GGP P GG P P G P PPP P G G K G P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPG-GFK--GGPPPPPP 789
Query: 377 P 375
P
Sbjct: 790 P 790
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXG--XXFGXXPXXPPPXPRG 420
P PP +GGP P GG P P G P PPP P G
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.7 bits (71), Expect = 0.37
Identities = 27/93 (29%), Positives = 28/93 (30%)
Frame = +2
Query: 377 GXXGXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXG 556
G + P PPP G P PPG G PPP G PP G
Sbjct: 701 GGSSALPPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISG 756
Query: 557 GXXXKXXXXXGXXXPXXXKXXP*KXFFKXXPPP 655
G G P P FK PPP
Sbjct: 757 GPPPPPPPPGGCPPP---PPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 391 GXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPP 546
G P P P GG P P G P PPP K GPP
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = -3
Query: 557 PPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKPXXXP 378
PP +GGP P GG P P G P PPP P G G K G P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPG-GFK--GGPPPPPP 789
Query: 377 P 375
P
Sbjct: 790 P 790
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXG--XXFGXXPXXPPPXPRG 420
P PP +GGP P GG P P G P PPP P G
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.7 bits (71), Expect = 0.37
Identities = 27/93 (29%), Positives = 28/93 (30%)
Frame = +2
Query: 377 GXXGXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXG 556
G + P PPP G P PPG G PPP G PP G
Sbjct: 701 GGSSALPPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISG 756
Query: 557 GXXXKXXXXXGXXXPXXXKXXP*KXFFKXXPPP 655
G G P P FK PPP
Sbjct: 757 GPPPPPPPPGGCPPP---PPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 391 GXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPP 546
G P P P GG P P G P PPP K GPP
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = -3
Query: 557 PPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKPXXXP 378
PP +GGP P GG P P G P PPP P G G K G P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPG-GFK--GGPPPPPP 372
Query: 377 P 375
P
Sbjct: 373 P 373
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXG--XXFGXXPXXPPPXPRG 420
P PP +GGP P GG P P G P PPP P G
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 32.7 bits (71), Expect = 0.37
Identities = 27/93 (29%), Positives = 28/93 (30%)
Frame = +2
Query: 377 GXXGXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXG 556
G + P PPP G P PPG G PPP G PP G
Sbjct: 284 GGSSALPPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISG 339
Query: 557 GXXXKXXXXXGXXXPXXXKXXP*KXFFKXXPPP 655
G G P P FK PPP
Sbjct: 340 GPPPPPPPPGGCPPP---PPPPPPGGFKGGPPP 369
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 391 GXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPP 546
G P P P GG P P G P PPP K GPP
Sbjct: 317 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXG 588
P P GGG P PG G PP G+ GPP GG G P G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGG----PPGHGGQGGPPGHGGMGGPPPGQGG 207
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/93 (26%), Positives = 29/93 (31%)
Frame = +1
Query: 376 GGXXXGXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXG 555
GG G P G GG G + P G G PP G GP G
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGP-----PPGQGGPGGPGGPG 215
Query: 556 GXXGKXPXXXGXXXXPKXXKXPLKXFF*XXPPP 654
G G P G + + L+ F PP
Sbjct: 216 GPGGMLPKSHGRSNMIEGVQRLLQIFKSDNGPP 248
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 427 GXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPE-XGGXXGKXPXXXGXXXXP 603
G GG G P P G PPP G G P G G P G P
Sbjct: 125 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 184
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXG 588
P P GGG P PG G PP G+ GPP GG G P G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGG----PPGHGGQGGPPGHGGMGGPPPGQGG 487
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/93 (26%), Positives = 29/93 (31%)
Frame = +1
Query: 376 GGXXXGXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXG 555
GG G P G GG G + P G G PP G GP G
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGP-----PPGQGGPGGPGGPG 495
Query: 556 GXXGKXPXXXGXXXXPKXXKXPLKXFF*XXPPP 654
G G P G + + L+ F PP
Sbjct: 496 GPGGMLPKSHGRSNMIEGVQRLLQIFKSDNGPP 528
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 427 GXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPE-XGGXXGKXPXXXGXXXXP 603
G GG G P P G PPP G G P G G P G P
Sbjct: 405 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 464
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/114 (22%), Positives = 31/114 (27%)
Frame = +2
Query: 398 PXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXX 577
P PPP G A P P PPP PP G
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 578 XXXGXXXPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPPP*KXKKXPPQ 739
P + P PPP P +PPPP + K+ P+
Sbjct: 293 RAGSPPPPPPPRGSPPTG---SLPPPQAGGSPPP--AGTGSPPPPPRQKRQAPE 341
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 386 GXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGG 559
G P PPP GG P PP PPP G PP G
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKP 390
P PP +G P P G P P G PPP P G G P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/98 (21%), Positives = 26/98 (26%)
Frame = +2
Query: 416 PPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXXXXXGXX 595
PPP G P P G PPP PP + G
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSL 312
Query: 596 XPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPP 709
P P PPP ++++ P PP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 745 PGXPPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P PP P PPP + PPP G P P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/114 (22%), Positives = 31/114 (27%)
Frame = +2
Query: 398 PXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXX 577
P PPP G A P P PPP PP G
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 578 XXXGXXXPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPPP*KXKKXPPQ 739
P + P PPP P +PPPP + K+ P+
Sbjct: 314 RAGSPPPPPPPRGSPPTG---SLPPPQAGGSPPP--AGTGSPPPPPRQKRQAPE 362
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 386 GXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGG 559
G P PPP GG P PP PPP G PP G
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKP 390
P PP +G P P G P P G PPP P G G P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/98 (21%), Positives = 26/98 (26%)
Frame = +2
Query: 416 PPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXXXXXGXX 595
PPP G P P G PPP PP + G
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSL 333
Query: 596 XPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPP 709
P P PPP ++++ P PP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 745 PGXPPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P PP P PPP + PPP G P P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/114 (22%), Positives = 31/114 (27%)
Frame = +2
Query: 398 PXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXX 577
P PPP G A P P PPP PP G
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 578 XXXGXXXPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPPP*KXKKXPPQ 739
P + P PPP P +PPPP + K+ P+
Sbjct: 299 RAGSPPPPPPPRGSPPTG---SLPPPQAGGSPPP--AGTGSPPPPPRQKRQAPE 347
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 386 GXVXPXXFXXPPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGG 559
G P PPP GG P PP PPP G PP G
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKP 390
P PP +G P P G P P G PPP P G G P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/98 (21%), Positives = 26/98 (26%)
Frame = +2
Query: 416 PPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXXXXXGXX 595
PPP G P P G PPP PP + G
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSL 318
Query: 596 XPXXXKXXP*KXFFKXXPPPXKKQKXXPXFXSXQNPPP 709
P P PPP ++++ P PP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 745 PGXPPXXXKKKNRXXXXXTXPXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P PP P PPP + PPP G P P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.9 bits (69), Expect = 0.65
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = +1
Query: 358 FXXXXXGGXXXGXXPXXFXPXPRGXGGGXXGXXPKXXP-XXPGXXGXXXXXPXPPPXXGK 534
F GG G P P P G GGG P+ P P G P P P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGG 76
Query: 535 XGPPEXGGXXGKXPXXXGXXXXPK 606
GG P G P+
Sbjct: 77 G----CGGGVAPAPIGGGYAQAPQ 96
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 423 PGXGGGGXGXXPKXXPPXPRGXG 491
P GGGG G P PP P G G
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCG 42
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPX---PPPXXGKXGPPEXGGXXGK 570
P P G GG P PG G P PP G GPP G G+
Sbjct: 204 PGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGPPGPAGNAGQ 258
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 376 GGXXXGXXPXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXG 555
G G P P G G G P PG G P G GPP
Sbjct: 188 GPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPA 247
Query: 556 GXXG 567
G G
Sbjct: 248 GPPG 251
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 523 GGGXXGPXXXXPXPRGXGGXFLGXXPXPP-PPXP 425
GGG GP PRG GG G PP PP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = +1
Query: 421 PRGXGG-GXXGXXPKXXPXXPGXXGXXXXXPX-----PPPXXGKXGPPEXG 555
P+G GG G G P P PG G P PP G GPP G
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = +1
Query: 400 PXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGP--PEXGGXXGKX 573
P F P P+ G P G G P PP G G P GG G
Sbjct: 375 PGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG 434
Query: 574 PXXXG 588
P G
Sbjct: 435 PPPPG 439
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = -3
Query: 587 PXXXGFXPXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXK 408
P G P P + G P GG G P PG G P P P G
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG-- 463
Query: 407 XXGXKPXXXPPXXXXXKXXP 348
G P P + P
Sbjct: 464 APGGNPFARGPSATGYRQSP 483
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 523 GGGXXGPXXXXPXPRGXGGXFLGXXPXPP-PPXP 425
GGG GP PRG GG G PP PP P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 550 FRGGXVSXXGGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXPGG 419
F G GGG G G GG G P PPPP GG
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG 63
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 544 GGXVSXXGGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXPGG 419
GG GGG G G GG G P PPPP GG
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGG---GCAPPPPPPACGG 120
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P P G G P P PG G P P G GPP G G
Sbjct: 143 PGPAGNAGNPGPKGPPGQPGAPGEQG-PNGRPGAPGAPGPQGPPGTAGNDG 192
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -3
Query: 566 PXXPPXSGGPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKPX 387
P PP GGP G G PG G P P P G G
Sbjct: 222 PPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGGPGLPGNDAAYC 281
Query: 386 XXPP 375
PP
Sbjct: 282 PCPP 285
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXXXX 600
P G G P P PG G P PP G GPP G G P G
Sbjct: 182 PPGPPGPDGNAGPAGAPGVPGPDG-DAGSPPPPGPPGPPGPPGNDGQPG-APGQDGQPGA 239
Query: 601 P 603
P
Sbjct: 240 P 240
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 420 PPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXETXPPR 548
PPG GGG G P P P GP PPP PPR
Sbjct: 798 PPGAPGGGGGMYPPLIPTRP--------GPGGPPP--NMAPPR 830
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/91 (26%), Positives = 27/91 (29%), Gaps = 3/91 (3%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXP---XXX 585
P P G P PG G P PPP + GPP GG P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP--SRFGPPGMGGMPPPPPPGMRYP 344
Query: 586 GXXXXPKXXKXPLKXFF*XXPPPXXKTKKXP 678
G P + P PPP + P
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/86 (26%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Frame = +2
Query: 470 PXPPGXXXXXXGXXX--PPPXXGNXAPPKXGGXXXKXXXXX---GXXXPXXXKXXP*KXF 634
P PPG G PPP PP GG G P P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 635 FKXXPPPXKKQKXXPXFXSXQNPPPP 712
PPP + P PPPP
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Frame = -3
Query: 587 PXXXGFXPXXPPXSG-GPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGX 411
P P PP G P P P PG G PPP P G
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
Query: 410 KXXGXKPXXXPP 375
G P PP
Sbjct: 328 PGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/91 (26%), Positives = 27/91 (29%), Gaps = 3/91 (3%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXP---XXX 585
P P G P PG G P PPP + GPP GG P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP--SRFGPPGMGGMPPPPPPGMRYP 354
Query: 586 GXXXXPKXXKXPLKXFF*XXPPPXXKTKKXP 678
G P + P PPP + P
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/86 (26%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Frame = +2
Query: 470 PXPPGXXXXXXGXXX--PPPXXGNXAPPKXGGXXXKXXXXX---GXXXPXXXKXXP*KXF 634
P PPG G PPP PP GG G P P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 635 FKXXPPPXKKQKXXPXFXSXQNPPPP 712
PPP + P PPPP
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Frame = -3
Query: 587 PXXXGFXPXXPPXSG-GPXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGX 411
P P PP G P P P PG G PPP P G
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
Query: 410 KXXGXKPXXXPP 375
G P PP
Sbjct: 338 PGMGGMPPPPPP 349
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 420 PPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPPXXETXPPR 548
PPG GGG G P P P GP PPP PPR
Sbjct: 798 PPGAPGGGGGMYPPLIPTRP--------GPGGPPP--NMAPPR 830
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -3
Query: 566 PXXPPXSGG-PXFPXXGGGXGXXXXXPXXPGXXGXXFGXXPXXPPPXPRGXGXKXXGXKP 390
P PP + G P P G G P PG G P PP P G G +
Sbjct: 226 PQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQG 285
Query: 389 XXXPP 375
P
Sbjct: 286 PPGDP 290
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P G G P P PG G P PP G GPP G G
Sbjct: 190 PPGPPGKQGPKGPNGEPGAPGTPGGNAL-PGPPGPPGPQGPPGADGLPG 237
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGK 570
P P G G P PG G P P G GPP G G+
Sbjct: 221 PGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQ 272
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 423 PGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPPP 524
P GGGG G P PP G G G PPP
Sbjct: 20 PSGGGGGCGCAPPPPPPAC-GCGGGGGGYAAPPP 52
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 523 GGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXPG 422
GGG P P P G GG P PPPP PG
Sbjct: 654 GGGSSMPMPVPP-PGGLGGFM--PPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 523 GGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXPG 422
GGG P P P G GG P PPPP PG
Sbjct: 654 GGGSSMPMPVPP-PGGLGGFM--PPPPPPPPMPG 684
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXXXX 600
P+G G P PG P P G GPP G G P G
Sbjct: 190 PKGASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAGPQGPPGPAGSPG-APGGPGQPGA 248
Query: 601 P 603
P
Sbjct: 249 P 249
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 423 PGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXPP 521
P GGGG G P PP P G G GP PP
Sbjct: 20 PSGGGGGCGCAP-PPPPPPCGCG----GPSLPP 47
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 544 GGXVSXXGGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXP 425
GG + GGG G G GG PPPP P
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 544 GGXVSXXGGGXXGPXXXXPXPRGXGGXFLGXXPXPPPPXP 425
GG + GGG G G GG PPPP P
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 505 PXXXXPXPRGXGGXFLGXXPXPPPPXPGG 419
P P P G G P PPPP P G
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 505 PXXXXPXPRGXGGXFLGXXPXPPPPXPGG 419
P P P G G P PPPP P G
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXP 576
P+G GGG G P G P P G G P G G P
Sbjct: 89 PQGGGGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGP 140
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 420 PPGXGGGGXGXXPKXXPPXPRGXGXXXXGPXXP 518
P G GGGG G P P G G P P
Sbjct: 89 PQGGGGGGGGQCSTCCRPGPPGAGGTPGKPGRP 121
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGK 570
P G G G PK P PG G P G GPP G G+
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG----PGRGGNRGPPGPRGPPGE 185
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGK 570
P G G G PK P PG G P G GPP G G+
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG----PGRGGNRGPPGPRGPPGE 185
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 400 PXXFXPXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXP 576
P F P P G GG P P P PPP G PP G P
Sbjct: 70 PNGFIPPPPGPGG-IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGG--GXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P PRG G G G P PG G P PP G+ GPP G G
Sbjct: 220 PGPRGPKGPPGSNGL-PSQNSGPPGPIGEMGP-PGPPGPRGEPGPPGPFGPPG 270
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGG--GXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P PRG G G G P PG G P PP G+ GPP G G
Sbjct: 220 PGPRGPKGPPGSNGL-PSQNSGPPGPIGEMGP-PGPPGPRGEPGPPGPFGPPG 270
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/113 (23%), Positives = 31/113 (27%), Gaps = 1/113 (0%)
Frame = +2
Query: 416 PPPGGXGGGXXAXXQKXXPXPPGXXXXXXGXXXPPPXXGNXAPPKXGGXXXKXXXXXGXX 595
PPP G G P PPP PP G + G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG---EPQDLSGEG 152
Query: 596 XPXXXKXXP*KXFFKXXPPPX-KKQKXXPXFXSXQNPPPP*KXKKXPPQXXXG 751
P K PPP + Q + + PPPP K PP G
Sbjct: 153 NASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXP-PPXXGKXGPPEXGGXXGKXPXXXGX 591
P PRG G P PG G P G+ GPP G G+ P G
Sbjct: 169 PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQ-PGHSGG 227
Query: 592 XXXP 603
P
Sbjct: 228 AGSP 231
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXXXX 600
P+G G P PG P P G GPP G G P G
Sbjct: 190 PKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPG-APGGPGQAGA 248
Query: 601 P 603
P
Sbjct: 249 P 249
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXXXX 600
P+G G P PG P P G GPP G G P G
Sbjct: 190 PKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPG-APGGPGQAGA 248
Query: 601 P 603
P
Sbjct: 249 P 249
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 421 PRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXGKXPXXXGXXXX 600
P+G G P PG P P G GPP G G P G
Sbjct: 190 PKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPG-APGGPGQAGA 248
Query: 601 P 603
P
Sbjct: 249 P 249
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 805 PXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P GPPP + PPP P P P +Q P
Sbjct: 88 PQPTPGPPPPRNNCLPPPGP---PPPCQQYQQP 117
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 805 PXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P GPPP + PPP P P P +Q P
Sbjct: 88 PQPTPGPPPPRNNCLPPPGP---PPPCQQYQQP 117
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 805 PXEXXGPPPXKXXKTPPPXPGXXPXPAXXHQTP 903
P GPPP + PPP P P P +Q P
Sbjct: 88 PQPTPGPPPPRNNCLPPPGP---PPPCQQYQQP 117
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXX--PXPPPXXGKXGPPEXGGXXG 567
P P+G G P P PG G P PP G GPP G G
Sbjct: 202 PGPQGDAGTPAQSEP-LTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKG 253
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +3
Query: 426 GXGGGGXG---XXPKXXPPXPRGXGXXXXGPXXPPP 524
G GGGG G P PP P G P PPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXX--PXPPPXXGKXGPPEXGGXXG 567
P P+G G P P PG G P PP G GPP G G
Sbjct: 202 PGPQGDAGTPAQSEP-LTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKG 253
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGG--GXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P P G G G G K P PG P PP G+ GPP G G
Sbjct: 182 PGPPGQAGAPGEPGSPAKSEPAVPGP-------PGPPGQAGQQGPPGPPGSNG 227
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P P G G P P P G P PP G G P G G
Sbjct: 139 PGPAGAPGNPGPQGPNGNPGAPA-HGGGQGPPGPPGPAGDAGSPGQAGAPG 188
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGK--XGPPEXGGXXG 567
P P G G P PG G P P P K GPP G G
Sbjct: 116 PGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPG 168
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P P G G P PG P P G GPP G G
Sbjct: 203 PGPPGTSGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPG 253
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 426 GXGGGGXGXXPKXXPPXPRGXG 491
G GGGG P PP P+G G
Sbjct: 16 GGGGGGPPRGPPQQPPQPQGGG 37
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 565 RXPPXFRGGXVSXXGGGXXGPXXXXPXPRGXGGXFLG 455
R FRGG GG G PRG GG F G
Sbjct: 52 RSSSGFRGGDRGRSPGGFRGDREGGFSPRGRGGGFRG 88
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXX-PXPPPXXGKXGPPEXGGXXG 567
P P G G P PG P PP G GPP G G
Sbjct: 223 PGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPG 274
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 415 PXPRGXGGGXXGXXPKXXPXXPGXXGXXXXXPXPPPXXGKXGPPEXGGXXG 567
P P G G P PG P P G GPP G G
Sbjct: 213 PGPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPG 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.153 0.533
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,473,229
Number of Sequences: 27780
Number of extensions: 245283
Number of successful extensions: 2028
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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