Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H03
(918 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 34 0.14
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 32 0.56
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.97
06_01_0941 + 7241050-7241331 31 1.3
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 31 1.3
05_01_0568 + 4973031-4973161,4973514-4974321,4974394-4974690 31 1.3
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 30 2.2
05_03_0665 - 16774043-16774522 30 3.0
01_01_0083 + 631196-631675 30 3.0
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 3.9
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 5.2
06_03_0082 + 16363742-16364632 29 6.8
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 6.8
04_04_1166 - 31427523-31428154,31428888-31429020 28 9.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 9.0
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = -2
Query: 770 PPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGG----GGGGGXXXXPPXP 636
PP GG G PPP G GG GGGGG PP P
Sbjct: 95 PPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPP 143
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGGXXXXPPXP 636
PPPP G GGGGG PP P
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPP 96
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 779 GGAPP-IXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP GG P G PP G GGGGGGG
Sbjct: 372 GSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGGGGGG 412
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 755 GXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G P G PPP G GGGGGGG
Sbjct: 383 GGRPMPGGGGPGAPPPYHGGGGGGGGGGGGGG 414
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.97
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 11/57 (19%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXX------GXXXPPPPXXXXGX-----FXGGGGGGGXXXXPP 642
G PP GG PP G PP P G GGGGGGG PP
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPP 161
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Frame = -2
Query: 779 GGAPPI-XGGXXXPPXXXGXXXPP--PPXXXXG-----XFXGGGGGGG 660
GGAP GG PP G PP PP G GGGGGGG
Sbjct: 95 GGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 728 GXXXPPPPXXXXGXFXGGGGGGG 660
G PP P G GGGGGGG
Sbjct: 342 GGVFPPTPDLGGG---GGGGGGG 361
Score = 22.2 bits (45), Expect(2) = 6.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 680 GGGGGGGXXXXP 645
GGGGGGG P
Sbjct: 375 GGGGGGGMLDKP 386
>06_01_0941 + 7241050-7241331
Length = 93
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PPPP G GGGGGGG
Sbjct: 20 PPPPSSSSGKRSGGGGGGG 38
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PPPP G GGGGGGG
Sbjct: 23 PPPPVSKKGGGGGGGGGGG 41
>05_01_0568 + 4973031-4973161,4973514-4974321,4974394-4974690
Length = 411
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -3
Query: 904 PPXXGXXFFXGXWGGGPFXXXXTXXPFXFXXXXGPX*KNXFXGEPPXFXGGXXXPPXGXG 725
P G F G GGGP P GP F G P F G P G
Sbjct: 151 PGRRGPVFAAGFHGGGPVFAAGRGGPVFAPGRRGPVFAAGFHGGGPVFAAGRGGPVFAPG 210
Query: 724 XXXP 713
P
Sbjct: 211 RRGP 214
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -3
Query: 904 PPXXGXXFFXGXWGGGPFXXXXTXXPFXFXXXXGPX*KNXFXGEPPXFXGGXXXPPXGXG 725
P G F G GGGP P GP F G P F G P G
Sbjct: 180 PGRRGPVFAAGFHGGGPVFAAGRGGPVFAPGRRGPVFAAGFHGGGPVFAAGRGGPVFAPG 239
Query: 724 XXXP 713
P
Sbjct: 240 RRGP 243
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 904 PPXXGXXFFXGXWGGGPFXXXXTXXPFXFXXXXGPX*KNXFXGEPPXFXGGXXXPPXGXG 725
P G F G GGGP P GP F G P F G P G
Sbjct: 209 PGRRGPVFAAGFHGGGPVFAAGRGGPVFAPGRRGPVFAAGFHGGGPVFAAGRGGPVFAAG 268
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 758 GGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
GG PP G P P G GGGGGGG
Sbjct: 12 GGLDQPPAGGGGG-PAPHSSDPGGVGGGGGGGG 43
>05_03_0665 - 16774043-16774522
Length = 159
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PPPP G GGG GGG
Sbjct: 84 PPPPGRRDGYLGGGGAGGG 102
>01_01_0083 + 631196-631675
Length = 159
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 7/52 (13%)
Frame = -2
Query: 770 PPIXGGXXXPPXXXGXXXPPPPXXXXGXFX-------GGGGGGGXXXXPPXP 636
PP PP PPP G + GGGGGGG P P
Sbjct: 59 PPSSSSSNTPPSSSSYWNYPPPQGGGGGYIPYYQPPAGGGGGGGGFNYPAPP 110
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Frame = -2
Query: 779 GGA---PPIXGGXXXPPXXX--GXXXPPPPXXXXGXFXGGGGGGG 660
GGA PP PP G P P G GGGGGGG
Sbjct: 50 GGAAAPPPSSSSSSAPPPRAAPGLLAPRPAAAGMGRMGGGGGGGG 94
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGGXXXXPP 642
PPPP G GGGGGG P
Sbjct: 19 PPPPGSSSGRGGGGGGGGDPGDWKP 43
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PPPP GGGGGGG
Sbjct: 17 PPPPPPGSSSGRGGGGGGG 35
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PPPP GGGGGGG
Sbjct: 18 PPPPPGSSSGRGGGGGGGG 36
>06_03_0082 + 16363742-16364632
Length = 296
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXPP 642
GG GG PP PPPP GG G G PP
Sbjct: 157 GGGDQFGGGEERPP-------PPPPPPFPDDSDGGDGASGEDLEPP 195
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGGXXXXPP 642
PPPP GGGGGG PP
Sbjct: 12 PPPPQHPPPPQAGGGGGGEFYRGPP 36
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGG 660
PP G F GGGGGGG
Sbjct: 229 PPAASGGGGGFIGGGGGGG 247
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 309 PPL*XXXKXKXXXKPPFXKKKXXXXXXPPXGGGXGP--PXKKKXXXGGAPPXXXXGKKXL 482
PP+ + PP + PP GG GP P GG PP G
Sbjct: 1125 PPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAP 1184
Query: 483 FFKKXGXXGXXGXPXXPXKKXXPP 554
G G P P PP
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPP 1208
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = -2
Query: 773 APPIX---GGXXXPPXXXGXXXPP---PPXXXXGXFXGGGGGGGXXXXPPXP 636
APP+ GG PP G PP PP G GG PP P
Sbjct: 1138 APPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPP 1189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.152 0.520
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,556,418
Number of Sequences: 37544
Number of extensions: 431004
Number of successful extensions: 4767
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3702
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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