Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_H03
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 43 3e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 43 3e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 43 3e-04
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.041
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.041
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.87
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 31 0.87
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 31 0.87
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.5
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 4.7
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 4.7
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.2
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 8.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGG 675
GG PPI GG PP G PPPP G F GG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXG----XXXPPPPXXXXG 690
GG PPI GG PP G PPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXG----XXXPPPPXXXXGXFXGGGG-------GGGXXXXPPXP 636
G PPI GG PP G PPPP G GG GG PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXPPXP 636
GG PP PP G PPPP GG PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGG 675
GG PPI GG PP G PPPP G F GG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXG----XXXPPPPXXXXG 690
GG PPI GG PP G PPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXG----XXXPPPPXXXXGXFXGGGG-------GGGXXXXPPXP 636
G PPI GG PP G PPPP G GG GG PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXPPXP 636
GG PP PP G PPPP GG PP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGG 675
GG PPI GG PP G PPPP G F GG
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXG----XXXPPPPXXXXG 690
GG PPI GG PP G PPPP G
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 11/58 (18%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXG----XXXPPPPXXXXGXFXGGGG-------GGGXXXXPPXP 636
G PPI GG PP G PPPP G GG GG PP P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXPPXP 636
GG PP PP G PPPP GG PP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP GG PP G PPP G G GG GG
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP GG PP G PP G G GG GG
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP+ GG P G PP G G GG GG
Sbjct: 153 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 191
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP GG PP G PPP G G GG GG
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP GG PP G PP G G GG GG
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 776 GAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
G PP+ GG P G PP G G GG GG
Sbjct: 433 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 471
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGG--GGGGXXXXPPXP 636
GG GG G PPP G GGG GGGG PP P
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGG--GGGGXXXXPPXP 636
GG GG G PPP G GGG GGGG PP P
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGG 663
GG GG G PPPP G GGGGGG
Sbjct: 90 GGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGG 663
GG GG G PPPP G GGGGGG
Sbjct: 33 GGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 71
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 728 GXXXPPPPXXXXGXFXGGGGGGG 660
G PPPP G GGGGG G
Sbjct: 51 GCAPPPPPPACGGGCGGGGGGCG 73
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 728 GXXXPPPPXXXXGXFXGGGGGGG 660
G PPPP G GGGGG G
Sbjct: 108 GCAPPPPPPACGGGCGGGGGGCG 130
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -2
Query: 785 FXGGAPP---IXGGXXXPPXXXGXXXPPPPXXXXG 690
F GG PP + GG PP G PPPP G
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 770 PPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXPP 642
PP+ G PP G PPPP G GG PP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 468 PXFXGGGPPPXXFFFXXGXPXPPXXGGXXXXPFFF 364
P GG PPP F P PP GG P F
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 772 PPXFXGGXXXPPXGXGXXXPPP 707
PP F GG PP G PPP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPP 108
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = -2
Query: 917 GXXPPPXXGGXFFXWXLGGGXXXXXXNXRAFXIXXPXXXLXKKXFXGGAPPIXGGXXXPP 738
G PPP G GGG + + F G P+ GG
Sbjct: 278 GGAPPPPSGSAMGGGG-GGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAK 336
Query: 737 XXXGXXXPPPPXXXXGXFXGGGGGGG 660
G P G GGGGGGG
Sbjct: 337 SGGGGGGIPGQSVYMGAGGGGGGGGG 362
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = -2
Query: 917 GXXPPPXXGGXFFXWXLGGGXXXXXXNXRAFXIXXPXXXLXKKXFXGGAPPIXGGXXXPP 738
G PPP G GGG + + F G P+ GG
Sbjct: 172 GGAPPPPSGSAMGGGG-GGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAK 230
Query: 737 XXXGXXXPPPPXXXXGXFXGGGGGGG 660
G P G GGGGGGG
Sbjct: 231 SGGGGGGIPGQSVYMGAGGGGGGGGG 256
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 692 GXFXGGGGGGGXXXXPPXP 636
G + GGGGGGG PP P
Sbjct: 27 GGYSGGGGGGGDAAPPPPP 45
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 773 APPIXGGXXXP-PXXXGXXXPPPPXXXXGXFXGGGGGG 663
AP GG P P G PPPP GGGGG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 773 APPIXGGXXXP-PXXXGXXXPPPPXXXXGXFXGGGGGG 663
AP GG P P G PPPP GGGGG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 773 APPIXGGXXXP-PXXXGXXXPPPPXXXXGXFXGGGGGG 663
AP GG P P G PPPP GGGGG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 773 APPIXGGXXXP-PXXXGXXXPPPPXXXXGXFXGGGGGG 663
AP GG P P G PPPP GGGGG
Sbjct: 770 APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 785 FXGGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
F G P GG PP G GGGGGGG
Sbjct: 21 FGVGGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGGGG 62
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 785 FXGGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGG 663
F G P GG G PP G GGGGGG
Sbjct: 21 FGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGGGG 61
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGG 660
GG P GG G PPP GGGGGGG
Sbjct: 24 GGGPA--GGGGGASKVGGGAAPPPGTSVYMGAGGGGGGGG 61
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 707 PXXXXGXFXGGGGGGGXXXXPPXP 636
P G GGGGGGG PP P
Sbjct: 25 PNDGCGCGCGGGGGGGGCCAPPPP 48
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -2
Query: 773 APPIXGGXXXPPXXXGXXXPPPPXXXXGXFXGGGGGGGXXXXP 645
+PP+ PP P P G GGGGGGG P
Sbjct: 55 SPPLPPKCECPPPTCNSCAPAPSSCGCG---GGGGGGGYASYP 94
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 391 PPXGG-GXXPPXKKKXXXGGPPP 456
PP GG G PP + + GGPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPP 695
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = -2
Query: 785 FXGGAPPIXG--GXXXPPXXXGXXXP-PPPXXXXGXFXGGGGGGGXXXXPP 642
F G PP+ G PP G PP G G GG GG PP
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 391 PPXGG-GXXPPXKKKXXXGGPPP 456
PP GG G PP + + GGPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPP 695
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 713 PPPXXXXGXFXGGGGGGG 660
PPP F GGGGGGG
Sbjct: 723 PPPVAPAVAFAGGGGGGG 740
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 716 PPPPXXXXGXFXGGGGGGGXXXXPP 642
PPPP G GGGGGG PP
Sbjct: 31 PPPPPPACGC---GGGGGGYAAPPP 52
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPP 705
G PP G PP G PPPP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPP 705
G PP G PP G PPPP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 779 GGAPPIXGGXXXPPXXXGXXXPPPP 705
G PP G PP G PPPP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPP 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.152 0.520
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,342,272
Number of Sequences: 27780
Number of extensions: 255187
Number of successful extensions: 1294
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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