Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G24
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.94 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.94 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.94 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 372 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 485
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 372 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 485
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 372 YSKSSGPNS--NSRLICEPCISRLRDASDFKKQVQECEKT 485
           +S S  P +  +S+L C+ C+  L   +D  +QV +C+ T
Sbjct: 530 FSGSCAPGAPLDSKL-CQQCVGNLASNNDRIRQVTKCKAT 568


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 299 QWKCLCNSPQRDNTDKXVGPGRHSLVLSAIITKL 198
           QW    +S +RD   +   P    LVL+ + T L
Sbjct: 14  QWNHTVSSGERDTRTEYYLPNWTDLVLAGLFTML 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,200
Number of Sequences: 438
Number of extensions: 3958
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)