Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G22
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.6
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 31 1.6
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 31 1.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.5
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 29 6.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.6
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 PRPPPXPPXPXPLXP-DARXXXXXXXPXPXGXPXPGXXTSGPLPVPXXXFAGGAGCLVXX 303
P PPP PP + P + P P G P G P P P AGG ++
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAK 669
Query: 302 L 300
L
Sbjct: 670 L 670
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -1
Query: 479 PRPPPXPPXPXPLXP-DARXXXXXXXPXPXGXPXPGXXTSGPLPVPXXXFAGGAGCLVXX 303
P PPP PP + P + P P G P G P P P AGG ++
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAK 495
Query: 302 L 300
L
Sbjct: 496 L 496
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 512 PPRLXGAXXXLPRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXPGXXTSGPLPVPXXXF 333
PP G + PP PP P L P + P P PG P P P F
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 332 AGG 324
GG
Sbjct: 781 KGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 512 PPRLXGAXXXLPRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXPGXXTSGPLPVPXXXF 333
PP G + PP PP P L P + P P PG P P P F
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 332 AGG 324
GG
Sbjct: 781 KGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 512 PPRLXGAXXXLPRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXPGXXTSGPLPVPXXXF 333
PP G + PP PP P L P + P P PG P P P F
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPIS-------GGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 332 AGG 324
GG
Sbjct: 364 KGG 366
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 479 PRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXP 378
P+PPP PP P P P R G P P
Sbjct: 182 PKPPPPPPIPPPGPPPPRVIHDEWIDIREGDPWP 215
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 479 PRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXP 378
P+PPP PP P P P R G P P
Sbjct: 182 PKPPPPPPIPPPGPPPPRVIHDEWIDIREGDPWP 215
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -1
Query: 479 PRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXPGXXTSGPLPVP 345
P PPP PP P P D P P P T PLPVP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP---TGVPLPVP 1377
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 807 PXSPQXPPRXNPXXXALXXXPLXXSCLXPXKPPPXTXXWXGXXXXPPXKPP 959
P P PP P + P S + P PPP G PP PP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSV-PPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 807 PXSPQXPPRXNPXXXALXXXPLXXSCLXPXKPPPXTXXWXGXXXXPPXKPP 959
P P PP P + P S + P PPP G PP PP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSV-PPPPPPLPPISSGAPPPPPPPPP 816
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -1
Query: 527 SXCAXPPRLXGAXXXLPRPPPXPPXPXPLXPDARXXXXXXXPXPXGXPXPGXXTSGPLPV 348
S P A P PPP PP P P + P P P P P P
Sbjct: 10 SQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPA-PYPQQAVPAPAPP 68
Query: 347 P 345
P
Sbjct: 69 P 69
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 513 PPPPARGXXXXXPAPARXPXPXP 445
PPPPA PAPA P P P
Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYP 73
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 346 GTGRGPXVXSPGXGXPXGXXXXXXXXXRASGXRGXGXGGXGGGRGXXXXAPXRRGG 513
G GRG + G G G G G G GG GGG G GG
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 436 GXRGXGXGGXGGGRGXXXXAPXRRGG 513
G G G GG GGGRG RGG
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGRGG 123
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 346 GTGRGPXVXSPGXGXPXGXXXXXXXXXRASGXRGXGXGGXGGGRG-XXXXAPXRRGG 513
G G+GP PG G SG RG G G GGRG P +GG
Sbjct: 403 GRGQGPDF-GPGRQGGRGQGPDFGPQDDFSGRRGSGGPGGRGGRGQEPDFGPGGQGG 458
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 436 GXRGXGXGGXGGGRGXXXXAPXRRGG 513
G RG G GG G GRG RGG
Sbjct: 812 GGRGGGFGGTGRGRGGGVFGGGGRGG 837
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 10/73 (13%)
Frame = -1
Query: 512 PPRLXGAXXXLPRPPPXP-----PXPXPLXPDARXXXXXXXPXPXGXP-----XPGXXTS 363
PP + PRPPP P P P P P P P PG
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 362 GPLPVPXXXFAGG 324
P P P + GG
Sbjct: 334 PPPPPPGMRYPGG 346
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 10/73 (13%)
Frame = -1
Query: 512 PPRLXGAXXXLPRPPPXP-----PXPXPLXPDARXXXXXXXPXPXGXP-----XPGXXTS 363
PP + PRPPP P P P P P P P PG
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 362 GPLPVPXXXFAGG 324
P P P + GG
Sbjct: 344 PPPPPPGMRYPGG 356
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 516 SPPPPARGXXXXXPAPARXPXPXPP 442
SPPPP G P P P PP
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 516 SPPPPARGXXXXXPAPARXPXPXPP 442
SPPPP G P P P PP
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 516 SPPPPARGXXXXXPAPARXPXPXPP 442
SPPPP G P P P PP
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,954,234
Number of Sequences: 27780
Number of extensions: 209284
Number of successful extensions: 1428
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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