Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G21
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 112 3e-25
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 112 3e-25
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 32 0.62
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 29 3.3
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 29 3.3
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 29 5.8
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 29 5.8
U40029-1|AAA81123.3| 360|Caenorhabditis elegans Serpentine rece... 29 5.8
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 112 bits (270), Expect = 3e-25
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Frame = +1
Query: 160 PLIDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIMIETGKTYMNHRGTFTNA 339
P ID E ++DSPKFR + + LE +L+++L+ + MI+ K Y N T +
Sbjct: 15 PKIDCSEAIQDSPKFRATVAQHAMYFNRLENRLNEMLRHITAMIDFSKNYTNTFYKLTVS 74
Query: 340 LWDLTG-SFSEDPTVMAPLNRMAHALQEMTKFHSILLDQVSRTVIKNLTAFIRVDIKGVK 516
+ L SFS +P ++ A D + L+ FI++++ V
Sbjct: 75 VNQLCDESFSGNPLASTTFQGLSEAYAHTVNLFRTYFDHSNVVTFTKLSNFIKIELTKVA 134
Query: 517 ESKHHFDKISNDLDLALIRNSQVSRHKSADVEEVVNLLLATRSCFRHTALDHVQKITMLQ 696
ES+ HF+ +S +D AL++N+ +SR K AD E N L A +CF HT LD+V I +
Sbjct: 135 ESRAHFENMSQSMDDALVKNASISRQKPADATEGRNALTAVGTCFAHTTLDYVANINIAH 194
Query: 697 ARKRHEILATFLSYLQACCTYY 762
A K H IL + ++ ++
Sbjct: 195 AHKDHMILDALWTLVRESSAFF 216
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 112 bits (270), Expect = 3e-25
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Frame = +1
Query: 160 PLIDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIMIETGKTYMNHRGTFTNA 339
P ID E ++DSPKFR + + LE +L+++L+ + MI+ K Y N T +
Sbjct: 15 PKIDCSEAIQDSPKFRATVAQHAMYFNRLENRLNEMLRHITAMIDFSKNYTNTFYKLTVS 74
Query: 340 LWDLTG-SFSEDPTVMAPLNRMAHALQEMTKFHSILLDQVSRTVIKNLTAFIRVDIKGVK 516
+ L SFS +P ++ A D + L+ FI++++ V
Sbjct: 75 VNQLCDESFSGNPLASTTFQGLSEAYAHTVNLFRTYFDHSNVVTFTKLSNFIKIELTKVA 134
Query: 517 ESKHHFDKISNDLDLALIRNSQVSRHKSADVEEVVNLLLATRSCFRHTALDHVQKITMLQ 696
ES+ HF+ +S +D AL++N+ +SR K AD E N L A +CF HT LD+V I +
Sbjct: 135 ESRAHFENMSQSMDDALVKNASISRQKPADATEGRNALTAVGTCFAHTTLDYVANINIAH 194
Query: 697 ARKRHEILATFLSYLQACCTYY 762
A K H IL + ++ ++
Sbjct: 195 AHKDHMILDALWTLVRESSAFF 216
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 7/220 (3%)
Frame = +1
Query: 166 IDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIMIETGKTYMNHRGTFTNALW 345
++F + + DSP FR+ L E +D + + + C +I K + F L
Sbjct: 6 LEFSDSISDSPWFRQNLHDHEVALDDAFKNIKLIENQCKELIACTKKLSTAQRAFAKTLS 65
Query: 346 DL------TGSFSEDPTVMAPLNRMAHALQEMTKFHSILLDQVSRTVIKNLTAFIRVDI- 504
+ T ++ + L + ++ L+ Q + ++ + F I
Sbjct: 66 EFKFETVGTNQTDDERFIATCLKEFGSLINQVEDERMKLVGQAEESYLEPIKKFRTEAIG 125
Query: 505 KGVKESKHHFDKISNDLDLALIRNSQVSRHKSADVEEVVNLLLATRSCFRHTALDHVQKI 684
+ +KE K+ +DK S+ L ++ +S ++ D L + F +L +V ++
Sbjct: 126 RTLKEEKNKYDKESSKFYQTLEKHLHLSTVRNNDFRAADAQLETQQKNFFQASLQYVAEV 185
Query: 685 TMLQARKRHEILATFLSYLQACCTYYHQXADLTEDLEPFL 804
+Q R R E + T SY+ + +++H + + +D +PFL
Sbjct: 186 QSVQERMRFEFVETLGSYVYSWLSFFHVGSVIHQDFKPFL 225
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 7/220 (3%)
Frame = +1
Query: 166 IDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIMIETGKTYMNHRGTFTNALW 345
++F + + DSP FR+ L E +D + + + C +I K + F L
Sbjct: 6 LEFSDSISDSPWFRQNLHDHEVALDDAFKNIKLIENQCKELIACTKKLSTAQRAFAKTLS 65
Query: 346 DL------TGSFSEDPTVMAPLNRMAHALQEMTKFHSILLDQVSRTVIKNLTAFIRVDI- 504
+ T ++ + L + ++ L+ Q + ++ + F I
Sbjct: 66 EFKFETVGTNQTDDERFIATCLKEFGSLINQVEDERMKLVGQAEESYLEPIKKFRTEAIG 125
Query: 505 KGVKESKHHFDKISNDLDLALIRNSQVSRHKSADVEEVVNLLLATRSCFRHTALDHVQKI 684
+ +KE K+ +DK S+ L ++ +S ++ D L + F +L +V ++
Sbjct: 126 RTLKEEKNKYDKESSKFYQTLEKHLHLSTVRNNDFRAADAQLETQQKNFFQASLQYVAEV 185
Query: 685 TMLQARKRHEILATFLSYLQACCTYYHQXADLTEDLEPFL 804
+Q R R E + T SY+ + +++H + + +D +PFL
Sbjct: 186 QSVQERMRFEFVETLGSYVYSWLSFFHVGSVIHQDFKPFL 225
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 499 DIKGVKESKHHFDKISNDL--DLALIRNSQVSRHKSADVEEVVNLLLATRSC--FRHTAL 666
D+KG+KES +DK+ ++ DL + + + + D + ++ A C F+H
Sbjct: 195 DLKGLKESNLEWDKLESNFEEDLNSVLSKMDTFSEKPDKTNLERIITAITECTTFKHKLF 254
Query: 667 DHVQKITMLQARKR 708
+ + K +L+ + +
Sbjct: 255 ESLSKFKLLRGKDK 268
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 133 ERQIIDKMKPLIDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIM 288
E +I + P+ D+DE + +P+ + E E AN++ LE++L ++ K C ++
Sbjct: 69 EDEITKDLVPIPDYDEHI-PAPQPKHMGEME-ANLEKLEEELVQINKNCKVL 118
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 313 NHRGTFTNALWD--LTGSFSEDPTVMAPLNRMA-HALQEMTK 429
N G +LW+ +G FSE+PT P+ R++ +A+ E T+
Sbjct: 367 NQMGQKARSLWNQKTSGHFSEEPTPRHPVTRVSKYAMAEFTR 408
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 133 ERQIIDKMKPLIDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIM 288
E +I + P+ D+DE + +P+ + E E AN++ LE++L ++ K C ++
Sbjct: 69 EDEITKDLVPIPDYDEHI-PAPQPKHMGEME-ANLEKLEEELVQINKNCKVL 118
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 133 ERQIIDKMKPLIDFDECLRDSPKFREQLETEEANIDGLEQKLDKVLKACSIM 288
E +I + P+ D+DE + +P+ + E E AN++ LE++L ++ K C ++
Sbjct: 69 EDEITKDLVPIPDYDEHI-PAPQPKHMGEME-ANLEKLEEELVQINKNCKVL 118
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 478 DSLSQFGKPGPAILNETWSSPAEHVPYGSVVPS 380
DS++Q+G P + E S ++VP S++P+
Sbjct: 1100 DSMAQYGDTDPGVFTEDGSFIGQYVPQKSLMPA 1132
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 478 DSLSQFGKPGPAILNETWSSPAEHVPYGSVVPS 380
DS++Q+G P + E S ++VP S++P+
Sbjct: 1284 DSMAQYGDTDPGVFTEDGSFIGQYVPQKSLMPA 1316
>U40029-1|AAA81123.3| 360|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 39 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 131 FFIYFTLNSAKYSQYFSSRFQI 66
FF FTLNSA YS Y++ F I
Sbjct: 12 FFPVFTLNSAYYSDYYAMLFII 33
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Frame = -2
Query: 504 DIHPYK-CSEILY--HSSGNLVQQY 439
++HP K C +IL+ SSGN+VQQY
Sbjct: 282 NLHPTKECKDILFLLDSSGNVVQQY 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,163
Number of Sequences: 27780
Number of extensions: 381467
Number of successful extensions: 1351
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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