Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G18
(896 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 2.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 3.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 8.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 8.7
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 147 YFLGVIYIFFVSLKTLITELRSPILCTRKDIR 52
Y L ++YI F L L L I C K +R
Sbjct: 49 YLLALLYILFTFLALLGNGLVIWIFCAAKSLR 80
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 19 LTTREFLKTLHPDIFSCTKYRR 84
LT+R+FL +L +F T+Y R
Sbjct: 302 LTSRDFLSSLAFRVFQSTQYIR 323
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 622 EQDRASHEPVLSQNFKSVSIIHSTLCI 542
EQ R EP +++V++IH L I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPI 135
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 622 EQDRASHEPVLSQNFKSVSIIHSTLCI 542
EQ R EP +++V++IH L I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPI 135
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 622 EQDRASHEPVLSQNFKSVSIIHSTLCI 542
EQ R EP +++V++IH L I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPI 135
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 157 NGEWYLIGMPG-KKNTITYQCCPEPYV 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 225 NGEWYLIGMPG-KKNTITYQCCPEPYV 250
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 497 DGEWYLLETPSVQTRLVTL*CQTHTYI 417
+GEWYL+ P + +T C Y+
Sbjct: 225 NGEWYLIGMPG-KKNTITYQCCPEPYV 250
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 256 SHPVYNTSFKQPWEPFLNTAL 318
SHP YN +F Q PF T +
Sbjct: 209 SHPAYNMTFAQN-GPFNTTTI 228
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 257 DENVLKAETQRGQYLKLAKTI 195
D NVL A+ GQY ++ +++
Sbjct: 62 DSNVLAAKVWNGQYARVQQSM 82
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,253
Number of Sequences: 438
Number of extensions: 4767
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -