Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G15
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 47 2e-05
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 47 2e-05
M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical pr... 33 0.22
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 30 2.7
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr... 29 6.3
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 6.3
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 321 NIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERFNIYLYE--ENNL 494
NIVL+E K + D+ +CKFKLG E +K++ +P W E+F++++++ + L
Sbjct: 229 NIVLVEGKGIRIDERIP--DAFCKFKLGQEKYKTKVCTGIEPKWVEQFDLHVFDSADQML 286
Query: 495 EVSLLA*RKTEKLYGKM 545
+++ + R T + G++
Sbjct: 287 QMACID-RNTNAIIGRL 302
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 321 NIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERFNIYLYE--ENNL 494
NIVL+E K + D+ +CKFKLG E +K++ +P W E+F++++++ + L
Sbjct: 315 NIVLVEGKGIRIDERIP--DAFCKFKLGQEKYKTKVCTGIEPKWVEQFDLHVFDSADQML 372
Query: 495 EVSLLA*RKTEKLYGKM 545
+++ + R T + G++
Sbjct: 373 QMACID-RNTNAIIGRL 388
>M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical
protein B0303.4 protein.
Length = 616
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 361 WSSGKSLASINTIFX*RFRRLLQYVKFSVFPHVLLYF-FSVISEQRKSASDPV 206
W G + +++ IF F + V FS+F V LYF F V S QR+ DPV
Sbjct: 546 WIFGGQMVAVS-IFLYYFPDVFDRVGFSIFIIVFLYFVFVVYSRQRRRQPDPV 597
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 231 NESPLPIRSMMSADTTSVFGTIGSIPKPSGIGNDRLSVSEYRLI-GLSSQCS 79
N S + S M A S+FG IG++P P+ D L++ E +I G + Q S
Sbjct: 1604 NSSMVTTTSSM-APGQSIFGNIGNVPVPTTAPTDNLALPEESVIEGSAGQSS 1654
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 177 TRWWYQQTSWTGSEADFRCSEITEKKYKS 263
T WW+ WTG+ D +I E +S
Sbjct: 219 TLWWFNSIPWTGARRDLEIDDIFELNERS 247
>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
protein F10C2.4 protein.
Length = 1081
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 460 DSIYICTRKTI*RYPCWHKGKQKNFMGRCVIDLSRLEKEKTH 585
+S+Y T T+ + PC + GR +ID+++LE E+ +
Sbjct: 666 NSVYGFTGATVGKLPCLEISQSVTAFGRKMIDMTKLEVERIY 707
>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
protein F43G6.1b protein.
Length = 1069
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +3
Query: 159 WIRWYRTRWWYQQTSWTGSEADFRCSEITEKKYKSTC 269
WIRW W ++ T D + E+ + TC
Sbjct: 469 WIRWISAEWKCERERMTSQNKDLWLKSVQERVEEGTC 505
>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
protein F43G6.1a protein.
Length = 1105
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +3
Query: 159 WIRWYRTRWWYQQTSWTGSEADFRCSEITEKKYKSTC 269
WIRW W ++ T D + E+ + TC
Sbjct: 505 WIRWISAEWKCERERMTSQNKDLWLKSVQERVEEGTC 541
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 514 KGKQKNFMGRCVIDLSRLEKEKTHDIWQELE-CGYGFIHMLIT 639
+GK + +GR +DL ++ + T D W LE C +G +H+ T
Sbjct: 352 QGKDEE-LGRLSVDLKLVQAKGTIDKWYPLEGCKHGDLHIKAT 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,873,472
Number of Sequences: 27780
Number of extensions: 454320
Number of successful extensions: 1233
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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