Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G15
         (930 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.9  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   6.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   9.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   9.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 144 LTVSVWIRWYRTRWWYQQTSWTGSEADFRCSEITEKKYKS 263
           LT+ +++  +R  WW+    WT +  +   S   E K+K+
Sbjct: 16  LTILIFVTSHRPAWWF----WTATSHE--ASAPAEGKFKT 49


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 512 IKENRKTLWEDASLTFLDSKKKRL 583
           +KE R  +W D +LT L   KKR+
Sbjct: 108 LKERR--IWRDDALTKLSLLKKRI 129


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 195  ADTTSVFGTIGSIPKPSGIGNDRLSVSE 112
            A+TT V G  G++   +G  +DR  +SE
Sbjct: 1859 AETTFVGGNQGNVVPGNGDRSDRPELSE 1886


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 195  ADTTSVFGTIGSIPKPSGIGNDRLSVSE 112
            A+TT V G  G++   +G  +DR  +SE
Sbjct: 1855 AETTFVGGNQGNVVPGNGDRSDRPELSE 1882


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,643
Number of Sequences: 438
Number of extensions: 6391
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)