Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G14
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.010
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.017
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.16
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.64
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 2.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.5
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 26 5.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 5.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 8e-04
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 707 PPPPKFFXXXEXPRXFP--PPXPP*XXXPPPPPPFXFXXXXPPXPXFFFPPP 856
PPPP P P PP P PPPPPP PP P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPP 782
Score = 30.7 bits (66), Expect = 0.28
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +2
Query: 584 LKXPPPPXFXXXPKXGXXPFXFLKTPFXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFPPP 763
LK PPPP P P P PP G PPPP P PPP
Sbjct: 729 LKSPPPP-----PPAVIVPTP-APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP---PPP 779
Query: 764 XPP 772
PP
Sbjct: 780 PPP 782
Score = 29.9 bits (64), Expect = 0.48
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +2
Query: 398 KXXPXPPPXFFSPXXXXXX---PPPXXXGGGKKXXXFSPPPXXGXXPPPP 538
K P PPP P PPP GG PP G PPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-PPPGVAGAGPPPP 778
Score = 29.9 bits (64), Expect = 0.48
Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 317 PPPPPXGGXKKXXFPXKXX-PPFXPXKKKXXPXPPPXFFSPXXXXXXPPPXXXGGGKKXX 493
PPPPP P PP P P PPP + PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 494 XFSPPPXXGXXP 529
++P P P
Sbjct: 792 YYAPAPQAEPEP 803
Score = 29.5 bits (63), Expect = 0.64
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +3
Query: 366 KXPPPFXPXKKKXXPXPPPXFFPP----FXXXXPXPPXXGGGXKXPXXFPPP 509
K PPP P P P P PP P PP G P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 502 PPPXXGXGPPPPXXXFFXXXXPPGXSXFKXPPPP 603
P P G PPPP PPG + PPPP
Sbjct: 754 PAPIMGGPPPPP--------PPPGVAGAGPPPPP 779
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.002
Identities = 44/169 (26%), Positives = 48/169 (28%), Gaps = 3/169 (1%)
Frame = +2
Query: 302 NXXXXPPPPPXGGXKKXXFPXKXXPPFXPXKKKXXPXPPPXFFSPXXXXXXPPPXXXGGG 481
N PPPPP P P + + P PPP +P PPP
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPL-------PPQGRSAPPPPPPRSAPSTGRQ-PPPLSSSRA 384
Query: 482 KKXXXFSPPPXXGXXPPPPGXXFFXXFXPXGXXXLKXPPPPXFXXXPKXGXXPFXFLKTP 661
PP G P P G PP P P +
Sbjct: 385 VSNPPAPPPAIPGRSAPA--------LPPLGNASRTSTPP-----VPTPPSLPPSAPPSL 431
Query: 662 FXXXPPLLFXGXXXXPP-PPKFFXXXEXPRXFP--PPXPP*XXXPPPPP 799
PP L G PP PP P P PP PP PPP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 33.5 bits (73), Expect = 0.039
Identities = 49/201 (24%), Positives = 52/201 (25%), Gaps = 13/201 (6%)
Frame = +2
Query: 293 PXXNXXXXPP-PPPXGGXKKXXFPX--KXXPPFXPXKKKXXPXPPPXFFSPXXXXXXPPP 463
P N PP PPP K PP P ++ PP S PPP
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Query: 464 XXXGGGKKXXXFSPPPXXGXXPPPPGXXFFXXFXP---XGXXXLKXP--PPPXFXXXPKX 628
P PPPP P + P PPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 629 GXXPF---XFLKTPFXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFP--PPXPP*XXXPPP 793
P TP PP L PP P P PP PP P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS---APPSLPMGAPAAPPLPP-SAPIAP 457
Query: 794 PPPFXFXXXXPPXPXFFFPPP 856
P P P P PPP
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPP 478
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.010
Identities = 46/181 (25%), Positives = 51/181 (28%), Gaps = 8/181 (4%)
Frame = +2
Query: 317 PPPPPXGGXKKXXFPXKXXPPFXPXKKKXXPXPPPXFFSPXXXXXX---PPPXXXGGGK- 484
PPP P + P P P P P P +P PP G
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 485 --KXXXFSPP-PXXGXXPPPPGXXFFXXFXPXGXXXLKXPPPPXFXXXPKXGXXPFXFLK 655
K +PP P PP P P PP P P P +
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA---PPVPK----PSVAAPP---VP 1172
Query: 656 TPFXXXPPLLFXGXXXXP-PPPKFFXXXEXPRXFPPPXPP*XXXPPPPPPFXFXXXXPPX 832
P PP+ P PPP P PP PP PP P P PP
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP---SAGLPPV 1229
Query: 833 P 835
P
Sbjct: 1230 P 1230
Score = 26.6 bits (56), Expect = 4.5
Identities = 32/156 (20%), Positives = 34/156 (21%), Gaps = 6/156 (3%)
Frame = +1
Query: 229 KKXXXXPXXPXXXXXXXXXXXAXPXXXXXPPPPPXXGXKKXPFPXKKXPPLFXPXXXXXX 408
K P P + P PP P G P P PP+ P
Sbjct: 1054 KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Query: 409 XXXXXXXXXXXXXXXPXP--PXXGGGXKXPKXF----PPPXXGXGPPPPXXXFFXXXXPP 570
P P G PK P P PP P P
Sbjct: 1114 VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA 1173
Query: 571 GXSXFKXPPPPXFFXXPXXXGXXXXFFKNPLXGXPP 678
S P P P P G PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 34.7 bits (76), Expect = 0.017
Identities = 40/154 (25%), Positives = 44/154 (28%), Gaps = 5/154 (3%)
Frame = +2
Query: 359 PXKXXPPFXPXKKKXXPXPPPXFFSPXXXXXXPPPXXXGGGKKXXXFSPPP---XXGXXP 529
P + PP K PPP PPP G+ PPP G
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGE---HMPPPPMHHEPGEHM 259
Query: 530 PPPGXXFFXXFXPXGXXXLKXPPPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXX 703
PPP P + PPP P P P PP+
Sbjct: 260 PPP---------PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 310
Query: 704 XPPPPKFFXXXEXPRXFPPPXPP*XXXPPPPPPF 805
PPPP E PPP PPPPF
Sbjct: 311 MPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPPF 342
Score = 32.7 bits (71), Expect = 0.068
Identities = 37/146 (25%), Positives = 40/146 (27%), Gaps = 5/146 (3%)
Frame = +2
Query: 413 PPPXFFSPXXXXXXPPPXXXGGGKKXXXFSPPPXX---GXXPPPPGXXFFXXFXPXGXXX 583
PPP PPP G+ PPP G PPP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEH---MPPPPMHHEPGEHMPPP---------PMHHEP 255
Query: 584 LKXPPPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFP 757
+ PPP P P P PP+ PPPP E P
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Query: 758 PPXPP*XXXPPPPPPFXFXXXXPPXP 835
P PPPP PP P
Sbjct: 316 MHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 29.1 bits (62), Expect = 0.84
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 596 PPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFPPPXP 769
PPP P P P PP+ PPPP E P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 770 P*XXXPPPPPPFXFXXXXPPXPXFFFP 850
P PPPP PP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 29.1 bits (62), Expect = 0.84
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 596 PPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFPPPXP 769
PPP P P P PP+ PPPP E P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 770 P*XXXPPPPPPFXFXXXXPPXPXFFFP 850
P PPPP PP P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 29.1 bits (62), Expect = 0.84
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 596 PPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFPPPXP 769
PPP P P P PP+ PPPP E P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 770 P*XXXPPPPPPFXFXXXXPPXPXFFFP 850
P PPPP PP P P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 29.1 bits (62), Expect = 0.84
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +2
Query: 596 PPPXFXXXPKXGXXPFXFLKTP--FXXXPPLLFXGXXXXPPPPKFFXXXEXPRXFPPPXP 769
PPP P P P PP+ PPPP E P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 770 P*XXXPPPPPPFXFXXXXPPXPXFFFP 850
P PPPP PP P P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 208 PPPPMH----HKPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 260
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 261 -PPPMHHEPGEHMPPP 275
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 221 PPPPMH----HEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 273
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 274 -PPPMHHEPGEHMPPP 288
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 234 PPPPMH----HEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 286
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 287 -PPPMHHEPGEHMPPP 301
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 247 PPPPMH----HEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 299
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 300 -PPPMHHEPGEHMPPP 314
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 260 PPPPMH----HEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 312
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 313 -PPPMHHEPGEHMPPP 327
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 PPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPPXXGGGXKXPXX 497
PPPP PPP + P PPP P P P G P
Sbjct: 273 PPPPMH----HEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMP-- 325
Query: 498 FPPP---XXGXGXPPP 536
PPP G PPP
Sbjct: 326 -PPPMHHEPGEHMPPP 340
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 716 PKFFXXXEXPRXFPPPXPP*XXXPPPPPPFXFXXXXPPXPXFFFP 850
PK + R FP P PPPP PP P P
Sbjct: 185 PKHHEFDDEDREFPAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEP 229
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.16
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -1
Query: 505 GGKXXGFFXPPPXXGGXGXXXXXGGK--KXGGGXGXXFFFXGXKGG-GXFXXEXXFFXXP 335
GG G PPP GG G GG+ GG G G +GG G F F
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 334 XXGGGGXXXXVXGXP 290
G GG G P
Sbjct: 251 LGGFGGGPGGFGGGP 265
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = -1
Query: 535 GGGXPXPXXGG-GKXXGFFXPPPXXGGXGXXXXXGGKKXGGGXGXXFFFXGXKGG-GXFX 362
G G P P GG G GF GG G G GG G G GG G F
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 361 XEXXFFXXPXXGGGG 317
F G GG
Sbjct: 256 GGPGGFGGGPGGHGG 270
Score = 25.8 bits (54), Expect = 7.8
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 603 GGGGXFKXXXPXGXXXXKKXXPGGGGXXPXXGGGEXFXXFXPPPXXXGGGXXXXXXGEKK 424
GGG P G G G G F P GGG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 423 XGGGXGXFFFXXGKKGG 373
GGG G F G GG
Sbjct: 254 FGGGPGGFGGGPGGHGG 270
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.64
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +2
Query: 755 PPPXPP*XXXPPPPPPFXFXXXXPPXPXFFFPPP 856
PP PP PPPPPP PP P PPP
Sbjct: 5 PPGNPP----PPPPPPGFEPPSQPPPP----PPP 30
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 387 PXKKKXXPXPPPXFFPPFXXXXPXPP 464
P P PPP F PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 692 GXXXXPPPPKFFXXXEXPRXFPPPXPP 772
G PPPP F E P PPP PP
Sbjct: 7 GNPPPPPPPPGF---EPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 317 PPPPPXGGXKKXXFPXKXXPPFXPXKKK 400
PPPPP G + P PP K+K
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = -2
Query: 855 GGGKKXXGXGGXXXXKXKGGGGGGXXF*GGXGGGKXRGXSXXKKNLGGGGXXXXPXKRRG 676
G G G GG + GGG G GG GG + G GG +G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Query: 675 G 673
G
Sbjct: 70 G 70
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -2
Query: 852 GGKKXXGXG-GXXXXKXKGGGGGGXXF*GGXGGGKXRGXSXXKKNLGGGGXXXXPXKRRG 676
GG+ G G G +GG GG GG GG+ G S + GG R
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG-GSSGGRGGAKGGAKVIIEPHRHA 81
Query: 675 G 673
G
Sbjct: 82 G 82
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 743 PRXFPPPXPP*XXXPPPPPPFXFXXXXPPXPXFFFPPP 856
P PPP P PP PP P PPP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/56 (23%), Positives = 18/56 (32%)
Frame = +3
Query: 297 PXTXXXXPPPPXXGXKKKXXSXKKXPPPFXPXKKKXXPXPPPXFFPPFXXXXPXPP 464
P PPPP + + P + + P PP + P P PP
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPP 239
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 810 KXKGGGGGGXXF*GGXG-GGKXRGXSXXKKNLGGGGXXXXPXKR 682
+ GG GG GG G GG RG +N G G P R
Sbjct: 504 RYSSGGRGGNYRRGGYGRGGFRRGGGYGNRNRGFTGSNSAPLAR 547
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -2
Query: 798 GGGGGXXF*GGXGGGKXRGXSXXKKNLGGGGXXXXPXKRRGG 673
G GG F GG GG + + GGG RGG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,040,352
Number of Sequences: 5004
Number of extensions: 44037
Number of successful extensions: 266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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