Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G11
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   2.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   2.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   8.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   8.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.6  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 412 GTETILIRIFGENKIWSVLSRHLIS 338
           G +  LI IFGE+   S +S HLIS
Sbjct: 241 GGDPELITIFGESAGGSSVSLHLIS 265


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 412 GTETILIRIFGENKIWSVLSRHLIS 338
           G +  LI IFGE+   S +S HLIS
Sbjct: 241 GGDPELITIFGESAGGSSVSLHLIS 265



 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 672 FXSRFMYIDRIRRVHLDDSNILLDERDLYKRMSFSAQRFSLAKSDRKQFC 821
           + S F Y+ +  +   +DS      RD  K   F A++  L K  R  +C
Sbjct: 528 YFSEFAYLGKPTK---EDSEWPSYSRDEPKYFIFDAEKTGLGKGPRTTYC 574


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 593 LGGLLNLENMCTQRKSLIKTLQRLMLVFRLSQCRWP*AMVRSIQAQWR 450
           L    N+E   +   S+   L+RL L+F  S  +W  +   ++   WR
Sbjct: 462 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQW--SSTHTLDVAWR 507


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 593 LGGLLNLENMCTQRKSLIKTLQRLMLVFRLSQCRWP*AMVRSIQAQWR 450
           L    N+E   +   S+   L+RL L+F  S  +W  +   ++   WR
Sbjct: 500 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQW--SSTHTLDVAWR 545


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 393 MSIVSVPCTKTVQTLVRELSPLRLYASNHRLRPTTLRQAE 512
           M+  S     T+QTL  ++SP R     +RL    L Q++
Sbjct: 398 MATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALIQSQ 437


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -3

Query: 824 TTELLSIRFRQREALSTERHTFIQITFIQKNVAIIQVY 711
           TT+LLS     R   S    T++ +T +   + ++ ++
Sbjct: 229 TTDLLSYNILLRRHYSMNSTTYVTLTIVLMTMTLMTLW 266


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 287 SMNCSNGRLLLKDIILNGNKVSTQDTPDFVFAE 385
           SM C NG++L ++ I N +         F FAE
Sbjct: 293 SMICLNGQVLKRESIHNSSNARFLMDSMFDFAE 325


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 128 PDFDYRSHSNKKNMKEITLFVL 193
           PD +YR+   ++ MK I  F L
Sbjct: 199 PDLNYRNSDVREEMKNIMKFWL 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,216
Number of Sequences: 438
Number of extensions: 5642
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)