Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G10
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...   198   6e-51
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z93388-11|CAB07660.2|  319|Caenorhabditis elegans Hypothetical p...    28   7.8  

>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score =  198 bits (482), Expect = 6e-51
 Identities = 104/212 (49%), Positives = 128/212 (60%), Gaps = 12/212 (5%)
 Frame = +2

Query: 143 PQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSD----------- 289
           P + VNK KK F+G+PAP GYV GVGRGATGFTTRSDIGPARD  ++ +           
Sbjct: 6   PGSLVNKTKKFFMGMPAPTGYVPGVGRGATGFTTRSDIGPARDPTELPEAGPVGPSPQGA 65

Query: 290 DRHAPPAAKRKKTXXXXXXXXXXXXXXXXFSGYSGSLFSKDPYDKDDAEADAIYESIDXX 469
              + P AKR +                 FSGYSGSLFSKDPYD++D +AD IY  +D  
Sbjct: 66  SSSSAPPAKRARDDDGDGEDLNEANYDE-FSGYSGSLFSKDPYDQEDEDADRIYNEVDDR 124

Query: 470 XXXXXXXXXXXXXXXXXXXXXQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQ 649
                                ++RPKIQQ F DLKR+L  V+EDEW AIPEVGD RN+ +
Sbjct: 125 LDERHKERREKKYKELVELFHKDRPKIQQGFQDLKRQLAEVTEDEWQAIPEVGDMRNKAK 184

Query: 650 RNPRAEKFTPLPDSVLSRNLG-GESSSSIDPG 742
           RN RAEKFTP+PDS+++ N+  G+ S SID G
Sbjct: 185 RNARAEKFTPVPDSIIAMNMNYGQMSHSIDSG 216



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
 Frame = +3

Query: 741 GSGLASMMPGVVTPGMLT--PSG----DLDLRKIGQARXRL 845
           G+  A    G++TPG  +  PS     DLDL KIGQAR ++
Sbjct: 236 GAAAAGAKSGIMTPGWKSDIPSSGTSTDLDLVKIGQARNKI 276


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 551  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 697
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 551  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 697
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 551  QQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLPDSVL 697
            Q Q + ++ EL++  E+E AAIPEV +   + +  P   + +P P  ++
Sbjct: 1369 QLQVATVEFELESAPEEESAAIPEVQEPLEKVEVQPDLSQNSPAPHKII 1417


>Z93388-11|CAB07660.2|  319|Caenorhabditis elegans Hypothetical
           protein T10C6.3 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 577 TFQVRELLLNFWPLLSISFQVFFKSFFSILLPLLIHPLVNGFIDCICLC 431
           +F    +LLN  P+LSIS+   F +F   LLP+++   +    +  C C
Sbjct: 77  SFSTLGVLLNIKPVLSISY--LFGNFSIFLLPVILISFLLMSFNRFCAC 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,675,572
Number of Sequences: 27780
Number of extensions: 356778
Number of successful extensions: 1119
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)