Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G10
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.7  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   8.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   8.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   8.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   8.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 526 SFQVFFKSFFSILLPLLIHPLVNGFIDCI 440
           S  V F +  S  LP+L+   V G I C+
Sbjct: 196 SSYVIFSAMGSFFLPMLVMLYVYGRISCV 224


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 633 LVIGNSATLAPRSLRRYQTASCLGTWGENRPPQSTQGSGLASMMP 767
           L++GNS   +PR L    T+S   T    RP  ST  + + S  P
Sbjct: 817 LMVGNSPASSPRYLSAAATSS---TSTSPRPASSTAATLVLSGCP 858


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 140 DLVLSSETGGDLSDFITNGEW 160


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 208 DLVLSSETGGDLSDFITNGEW 228


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 686 DSVLSRNLGGESSSSIDPGVW 748
           D VLS   GG+ S  I  G W
Sbjct: 208 DLVLSSETGGDLSDFITNGEW 228


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 693 SCLGTWGENRP 725
           + LG W ENRP
Sbjct: 322 TALGCWNENRP 332


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 450 MNPLTRGWMRRGRSIEKKDLKKTWKDIDRRGQKFN 554
           ++P+TRG +RRG  ++   L   W  +   G+K N
Sbjct: 264 ISPVTRGLVRRG-ILQSGTLNAPWSYMS--GEKAN 295


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 450 MNPLTRGWMRRGRSIEKKDLKKTWKDIDRRGQKFN 554
           ++P+TRG +RRG  ++   L   W  +   G+K N
Sbjct: 264 ISPVTRGLVRRG-ILQSGTLNAPWSYMS--GEKAN 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,944
Number of Sequences: 438
Number of extensions: 4034
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)