Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G08
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199...    29   4.9  
03_03_0259 + 15937549-15938307,15938393-15938767                       29   4.9  
03_02_0314 + 7398247-7400877                                           29   4.9  
05_06_0129 - 25856981-25857568,25857652-25858058,25858227-25858410     29   6.5  

>04_03_0819 + 20018496-20019487,20019587-20019721,20019834-20019978,
            20020135-20020416,20020649-20020910,20021028-20021224,
            20021315-20021425,20022341-20022392,20022442-20022584,
            20023121-20023210,20023300-20023800,20024108-20024176,
            20024866-20025011,20025475-20025530,20026140-20026286,
            20027405-20027530,20027608-20027876,20028026-20028127
          Length = 1274

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 878  PSFLIRXXWLDGKRFQTXEILLIYPRSG 795
            PSFL+   +  GKR    E+L  YP SG
Sbjct: 1125 PSFLLNSGYFTGKRKAESEVLSKYPTSG 1152


>03_03_0259 + 15937549-15938307,15938393-15938767
          Length = 377

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = -2

Query: 466 DELHTILRYIIISN*TQFRHVIYVLFFQYCVVFKT*AA-RKLSEH*QY-------LPYRP 311
           D +  +++ I IS  T  + + Y  +    +  K  AA + L +H QY        P  P
Sbjct: 258 DIVSLMMQEIAISKGTFTQGIYYAPYIMRLIQDKLGAAGQNLKKHKQYKPRLQLGAPCAP 317

Query: 310 RSKGNIH*GAVL*FAPPPDPGP 245
           R+  + H GA    APPP P P
Sbjct: 318 RTAPSSHPGASSSSAPPPPPPP 339


>03_02_0314 + 7398247-7400877
          Length = 876

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +3

Query: 213 LVSLVFLSFISGPGSGGGANQRTAPQWMLPLLLGLYGRYCQCSL 344
           L S  F  F  GP             W LP  + L G++C CS+
Sbjct: 399 LWSTEFNLFFCGPKEQDATENAPLYAWDLPSRISLIGQHCSCSI 442


>05_06_0129 - 25856981-25857568,25857652-25858058,25858227-25858410
          Length = 392

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = -2

Query: 466 DELHTILRYIIISN*TQFRHVIYVLFFQYCVVFKT*AA-RKLSEH*QYLP-------YRP 311
           D +  +++ I IS  T  + + Y  +    +  K  A  + L +H QY P       + P
Sbjct: 202 DIVSLMMQEIAISKGTFTQGIYYAPYITRLIQDKLGAVGQNLKKHKQYKPRLQLGALHAP 261

Query: 310 RSKGNIH*GAVL*FAPPPDPG 248
           R+  + H GA    APPP PG
Sbjct: 262 RAAPSSHPGASSSSAPPPPPG 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,503
Number of Sequences: 37544
Number of extensions: 368388
Number of successful extensions: 787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)