Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G07
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...    57   3e-08
AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...    57   3e-08
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...    57   3e-08

>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 165 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKE
Sbjct: 29  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 69



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 89  RVDETLKKKRIFRKFTYRGVDLDQLL 166
           +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLL 29


>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 165 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKE
Sbjct: 28  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 68



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 89  RVDETLKKKRIFRKFTYRGVDLDQLL 166
           +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 3   QVDENLKKKRTFKKFTYRGVDLDQLL 28


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 165 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKE
Sbjct: 29  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 69



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 89  RVDETLKKKRIFRKFTYRGVDLDQLL 166
           +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLL 29


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,525,976
Number of Sequences: 53049
Number of extensions: 232710
Number of successful extensions: 619
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)