Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G06
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...    91   1e-18
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...    91   1e-18
AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p pro...    29   8.6  
AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17...    29   8.6  
AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA...    29   8.6  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/92 (45%), Positives = 52/92 (56%)
 Frame = +2

Query: 47  AWLTFIWLFNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSF 226
           +W+ FIWL +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSF
Sbjct: 54  SWIAFIWLLSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSF 113

Query: 227 PSGHASRAVLISFILIYFDSVSIIFYPPLMAW 322
           PSGHASRA  +         + IIF  P+ AW
Sbjct: 114 PSGHASRAFFVLLFFAKLYPLHIIFLMPVTAW 145


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/92 (45%), Positives = 52/92 (56%)
 Frame = +2

Query: 47  AWLTFIWLFNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSF 226
           +W+ FIWL +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSF
Sbjct: 54  SWIAFIWLLSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSF 113

Query: 227 PSGHASRAVLISFILIYFDSVSIIFYPPLMAW 322
           PSGHASRA  +         + IIF  P+ AW
Sbjct: 114 PSGHASRAFFVLLFFAKLYPLHIIFLMPVTAW 145


>AY089585-1|AAL90323.1|  588|Drosophila melanogaster RE12138p
           protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 396 YPHLLCCPVDSDVQPIXLEMDTETTQAIS 310
           YPHLL CPV S++ P  +    +T   ++
Sbjct: 197 YPHLLSCPVPSELPPPTVNSFPKTVSLVA 225


>AL121806-4|CAB65881.1|  588|Drosophila melanogaster EG:BACR42I17.3
           protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 396 YPHLLCCPVDSDVQPIXLEMDTETTQAIS 310
           YPHLL CPV S++ P  +    +T   ++
Sbjct: 197 YPHLLSCPVPSELPPPTVNSFPKTVSLVA 225


>AE014298-155|AAF45587.1|  588|Drosophila melanogaster CG11384-PA
           protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 396 YPHLLCCPVDSDVQPIXLEMDTETTQAIS 310
           YPHLL CPV S++ P  +    +T   ++
Sbjct: 197 YPHLLSCPVPSELPPPTVNSFPKTVSLVA 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,869,484
Number of Sequences: 53049
Number of extensions: 685033
Number of successful extensions: 1308
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)