Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G06
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    37   0.022
U39648-9|AAM15605.1|  186|Caenorhabditis elegans Hypothetical pr...    36   0.051
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    30   2.5  

>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
            F21C10.7 protein.
          Length = 2541

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 18/60 (30%), Positives = 35/60 (58%)
 Frame = +2

Query: 587  KIVKYCFMNMTRAWAITNVQLSHKSFLSDLSFTLIGISDLSLTRLHIRVQNLNQYNDKKK 766
            + +K C +N T +  I+  +L H  +   ++    G+++ SLT LH+R ++L +Y  KK+
Sbjct: 2177 EFLKICHVNDTYSIIISPAKLEHAGYYKMIAENKRGVTE-SLTVLHVRPRSLQKYQQKKQ 2235


>U39648-9|AAM15605.1|  186|Caenorhabditis elegans Hypothetical
           protein T13C5.6 protein.
          Length = 186

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 158 FVRRRRPVPM-NKLMEVGPDKFSFPSGHASRAVLI 259
           +  R RP+   +KL+E   D +SFPSGH+SRA ++
Sbjct: 85  YFHRERPIKTYSKLLEHTVDIYSFPSGHSSRAAML 119


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +2

Query: 512 NIKKCIKH--LESLNDSNMLNIN*YYFKIVKYCFMNMTRAWAITNVQLSHKSFLSDLSFT 685
           NI+K +K    ESL  ++        F I + C   +TR W +   +L   S   + SF 
Sbjct: 29  NIQKLVKTGIQESLKSAHRNFSRSSTFSISEECVRYLTR-WLLAERRLEQPSAAMNESFE 87

Query: 686 LIGISDLSLTRLHIRVQNLNQYN 754
           L G+ DLS          LN +N
Sbjct: 88  LTGLIDLSFGSTISGKHKLNAWN 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,123,746
Number of Sequences: 27780
Number of extensions: 362233
Number of successful extensions: 670
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)