Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G05
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 29 0.87
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 1.2
SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.5
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 28 1.5
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 27 3.5
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 3.5
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.5
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 27 3.5
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 4.7
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 27 4.7
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 4.7
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 26 6.1
SPAP8A3.02c |||2 OG-Fe|Schizosaccharomyces pombe|chr 1|||Manual 26 8.1
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 275 VNTLKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGN 451
VN+ R D N + + T ++ + N+ K+D+I P+ NN VL +G+
Sbjct: 474 VNSTLRSLCKDINDLIRLSGTCTVEDPNGDLYNFNGSMKLDSIQGEIPLSNNDVLYRGS 532
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 113 FSELNNIIVLCKNYILKVKINKTERCI 193
FS L ++I+LC +L+ K N +RCI
Sbjct: 38 FSSLLSVILLCIFTLLRTKFNTYDRCI 64
>SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 281
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 284 LKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNT 433
L+R + ++ PV +EV + +++ + S + T+ N NN P+ +NT
Sbjct: 220 LQRQSADSYSTPVCIEVDSEDWKDLVWKSQYATENANTNSINNSPLSSNT 269
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 308 FNKPVEVEVTIIND--EEIEFVSNWVTDYK 391
FN + T+ +D E++ F S W+TDYK
Sbjct: 801 FNSAISENPTLKSDRSEKVAFYSAWITDYK 830
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 482 EECISFDRNKDIAWTNKSLSKYINQHCELTNNIQLRDMVDSVS---SNLIKMIKKLNQWY 652
++ S N++ N S +N+ +L N ++L + + + L K+I+K+N+
Sbjct: 13 QDAYSVRENENELHINNSGMSELNKKLQLPN-VELSTLSHTQEQEFNELNKLIRKINELQ 71
Query: 653 QQKIYEDYPKNITNS 697
+ + ED K +TN+
Sbjct: 72 EFYLLEDLAKPVTNA 86
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/60 (20%), Positives = 30/60 (50%)
Frame = +2
Query: 254 CKITMESVNTLKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNT 433
CK + S +++ + + ID++ + +T + FVS + +++N F + ++T
Sbjct: 116 CKASFFSTDSVNKDSTIDYDALQKDPLTYVKSCRARFVSKDTKSFSYSSLANTFSLISST 175
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 596 VDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFTI 724
+D V+SN + + L + K+ E P N+ +Y+N F+I
Sbjct: 354 IDKVTSNDLYLDNNLQSHF--KVTESQPTNLGRKEYSNSPFSI 394
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 27.1 bits (57), Expect = 3.5
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 616 ITRDRVDHIA-QLNVVCQFTMLVNIF**TFICPR-YIFISVKRYAFFSWEWISFMCIIAL 443
+ R+R+D L+ + T+L + F P Y+F YA F+ +S M +A+
Sbjct: 470 VLRNRIDSYEYDLDQLLLGTILFTVL--IFFLPTIYVF-----YAAFALTRVSVMTCLAI 522
Query: 442 CENSIIFNGKII*YIVYFIICDPVR 368
CE + F ++ I DP R
Sbjct: 523 CETMLAFLNHFPLFVTMLRIKDPYR 547
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 4.7
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 617 LIKMIKKLNQWYQQKIYEDYPK 682
+++ I++L Y+Q +YE+YP+
Sbjct: 303 VLRKIQQLKDSYEQSLYEEYPQ 324
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 166 HFQNIIFTQHNNIIKFTKISFLHTSQTC 83
HFQ+I H N ++F K+ L + + C
Sbjct: 228 HFQHIGINVHTNSLEFKKVEKLPSGELC 255
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 254 INIKIINMTGTNYIILIPNSLYTVLFCLFSLSE 156
I + ++I PN+ YTVL FSLSE
Sbjct: 592 IQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSE 624
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 449 NYAHERNPFPREECISFDRNKDIAWTNKSLSKYINQHC 562
NY++E ++E + D++K A KY+ HC
Sbjct: 674 NYSNETITLKKDEIV-LDKSKSYACCTSESHKYVQGHC 710
>SPAP8A3.02c |||2 OG-Fe|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 305 DFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGNYAHERNPFP 478
DF V V I E I + N + + N+ NN P E ++ G +H PFP
Sbjct: 36 DFENWTVVPVETI--EGINYYPNCLPESVQRNLINNVPKELLSIYGSGKQSHLYIPFP 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,427,709
Number of Sequences: 5004
Number of extensions: 72989
Number of successful extensions: 250
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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