Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G05
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024495-1|AAB70338.3|  399|Caenorhabditis elegans Nuclear hormo...    31   1.1  
Z81035-4|CAB02737.1|  503|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical...    30   2.5  
AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine re...    29   3.3  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z83128-6|CAB05638.2|  353|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF125971-3|AAN73292.1|  152|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF125971-2|AAN73291.1|  458|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AF024495-1|AAB70338.3|  399|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 125 protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
 Frame = +2

Query: 287 KRMADIDFNK------PVEVEV--TIINDEEIEFVSNWVTDYKIDNISNNFPIEN 427
           K +A +D++K      P  V +  T+++ E +EF S W++DY ++++     +++
Sbjct: 223 KYVATVDYHKANPDTLPTNVVIHNTLVDIENVEFDSTWLSDYPVEHVRRYLSVQH 277


>Z81035-4|CAB02737.1|  503|Caenorhabditis elegans Hypothetical
           protein C15H11.5 protein.
          Length = 503

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 542 KYINQHCEL-TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYP 679
           KYI +H ++   +  L   +D V+S+ I+  K++   YQ++I+EDYP
Sbjct: 156 KYIKEHNQMHLLHSFLVPQIDRVNSSHIQYDKEMK--YQRQIFEDYP 200


>AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical
           protein Y37A1B.9 protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 257 KITMESVNTLKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKI---DNISNNFPIEN 427
           K+   ++ +L   +  DFN      ++IIN+  +E V      Y I   ++I N F I N
Sbjct: 94  KVENSNLTSLSFFSSYDFNFCYYTGISIINNSLLEHVDILKKAYYIRANEDIENVFQIMN 153

Query: 428 NTVLTKGNYAHERN 469
           NT L      +  N
Sbjct: 154 NTKLDASKLCNRGN 167


>AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein64 protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/88 (19%), Positives = 41/88 (46%)
 Frame = +2

Query: 515 IAWTNKSLSKYINQHCELTNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITN 694
           + +TN     YI  + +   N  +  +V S+    +  +K++++     I +    N+T+
Sbjct: 154 LTFTNSEFCGYIGWYGDFLKNAVIVAIVVSIDILTVVKVKQMSKKISSSISDQAHSNLTS 213

Query: 695 SQYTNIKFTISICRITL*QTLSYL*VNR 778
            +   +K T++   + + + L+Y  V R
Sbjct: 214 REIRFLKQTVTQGSVFMLELLTYFFVPR 241


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 404 SNNFPIENNTVLTKGNYAHERNPFPREECISFD 502
           SN +P+ NN ++T GN+ ++   +   + IS D
Sbjct: 204 SNFYPVPNNGIITTGNWTNQHTFYMATKPISID 236


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 404 SNNFPIENNTVLTKGNYAHERNPFPREECISFD 502
           SN +P+ NN ++T GN+ ++   +   + IS D
Sbjct: 168 SNFYPVPNNGIITTGNWTNQHTFYMATKPISID 200


>Z83128-6|CAB05638.2|  353|Caenorhabditis elegans Hypothetical
           protein W01D2.4 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -3

Query: 532 FICPRYIFISVKRYAFFSWEWISFMCIIALCENSIIFNGKII*YIVYFIICDPVRNKFNL 353
           F  P  + I + +   F W+W S     A+C   ++FN  I   +V  I+   +R K+ L
Sbjct: 265 FFAPTPLLIIISQ---FVWQWSSG----AICLAYLVFNRTIRNLVVKMILPKKIRLKYGL 317

Query: 352 FI 347
           +I
Sbjct: 318 YI 319


>AF125971-3|AAN73292.1|  152|Caenorhabditis elegans Hypothetical
           protein Y4C6B.4b protein.
          Length = 152

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 469 ISFMCIIALCENSIIFN 419
           +SFMC++++C N II N
Sbjct: 16  LSFMCLVSVCSNYIIIN 32


>AF125971-2|AAN73291.1|  458|Caenorhabditis elegans Hypothetical
           protein Y4C6B.4a protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 469 ISFMCIIALCENSIIFN 419
           +SFMC++++C N II N
Sbjct: 16  LSFMCLVSVCSNYIIIN 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,555,520
Number of Sequences: 27780
Number of extensions: 397058
Number of successful extensions: 1202
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)