Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_G04
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 81 2e-16
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 61 2e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 52 8e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 42 2e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 41 2e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 5e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 39 8e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 39 0.001
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 38 0.003
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 38 0.003
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 37 0.004
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.17
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 28 1.5
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.7
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.7
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 3.6
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 27 4.7
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 27 4.7
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 27 4.7
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 6.2
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 26 6.2
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 26 6.2
SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces p... 26 6.2
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 8.2
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 81.4 bits (192), Expect = 2e-16
Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Frame = +1
Query: 166 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAF--RXXXXXXXXXXXXHLIRHDNTVHL 339
KK+ C + C +SRP L QHL TH N R F HL H H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHT 78
Query: 340 KIKTDVIYSC--PECMQVFANRQNLKRHMQKKHIQGINNYCC--EHCKKYFRKINQLRSH 507
+K +SC C F +Q+L+RH++ + Y C E C + F K QLRSH
Sbjct: 79 NVKP---FSCHYDGCDAQFYTQQHLERHIEVH--RKPKPYACTWEGCDECFSKHQQLRSH 133
Query: 508 MYQ-HTGIKSFKC--NKCFKEFITHYEKRKHM-RCH-KI--YIC--EEC--KKQFDKYND 654
+ HT + + C C F T + + H+ R H KI Y C E C + F+K++
Sbjct: 134 ISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQ 193
Query: 655 FQKHKKEHDTKEYCCDKCGVSFKERILIVRHLKKHSKVIID---ISLPXQKLWKTYSRNS 825
Q H +E C CG FK + H+ H + + P + K+++R+S
Sbjct: 194 LQNHIREAHVPS--CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSS 251
Query: 826 NLKQHI 843
LK+HI
Sbjct: 252 ALKKHI 257
Score = 68.9 bits (161), Expect = 9e-13
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Frame = +1
Query: 169 KVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXH--LIRHDNTVHLK 342
K C ++GC F L +H+ H + + H L H + H
Sbjct: 81 KPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTH 140
Query: 343 IKTDVIYSCP--ECMQVFANRQNLKRHMQKKHIQGINNYCCEH--CKKY--FRKINQLRS 504
+ + Y C +C FA +Q L+ H+ + H + I +Y C H C + F K +QL++
Sbjct: 141 L---LPYPCTYQDCELRFATKQKLQNHVNRAH-EKIISYSCPHESCVGHEGFEKWSQLQN 196
Query: 505 HMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCH-------KIYIC--EECKKQFDKYNDF 657
H+ + + S C+ C ++F T R H+ H K Y C E CKK F + +
Sbjct: 197 HI-REAHVPS--CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSAL 253
Query: 658 QKHKKE-HD-TKEYCCDKCGVSFKERILIVRHLKK 756
+KH H+ + CD CG F + ++ RHL++
Sbjct: 254 KKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 34.7 bits (76), Expect = 0.018
Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Frame = +1
Query: 163 EKKVHKCTFNGCTTAFSRPFRLTQHL-LTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHL 339
E+K + C GC +F+R L +H+ + H AF L RH
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTC 291
Query: 340 KIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQH 519
K K Y EC + + H QK+ + +N + KK IN++ H Y+
Sbjct: 292 K-KAHKPY-INECGIKHDGIEGVAIHDQKEK-ELSSNLVSDVAKKI---INEVTGHGYKE 345
Query: 520 TGIKSFKCNKCFKEFITHYEKRKHMRCH 603
S +C F Y+ +H+ H
Sbjct: 346 AREYSCSFPECNYRFKRLYDMHRHLNSH 373
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +1
Query: 400 QNLKRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITH 573
+N K + NY C C K F + L+SHM HT + F+C+ C K F
Sbjct: 553 ENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQ 612
Query: 574 YEKRKHMRCH---KIYICEECKKQFDKYNDFQKHKK 672
++KR+H + H K + C C ++F + + +H K
Sbjct: 613 HDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 50.0 bits (114), Expect = 4e-07
Identities = 27/83 (32%), Positives = 37/83 (44%)
Frame = +1
Query: 181 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLKIKTDVI 360
CTF GC F+R + L H+ TH N R F+ RH+ +H IK
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQ-LHTGIKA--- 627
Query: 361 YSCPECMQVFANRQNLKRHMQKK 429
++C C Q FA L RH + +
Sbjct: 628 FACVTCNQRFARMDALNRHYKSE 650
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 52.4 bits (120), Expect = 8e-08
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +1
Query: 451 YCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCH---KIYI 615
Y C + C K + + SH+ H + ++C+ C F+ H++ ++H+R H + Y+
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 616 CEECKKQFDKYNDFQKHKKEH 678
C EC K+F++ + +HK+ +
Sbjct: 503 C-ECLKRFNRLDALNRHKQRN 522
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 181 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLKI-KTDV 357
C +NGC +R + + H+ TH++ R +R + HD HL+I +
Sbjct: 445 CLYNGCNKRIARKYNVESHIQTHLSDRPYR-----CDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 358 IYSCPECMQVFANRQNLKRHMQK 426
Y C EC++ F L RH Q+
Sbjct: 500 PYVC-ECLKRFNRLDALNRHKQR 521
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 544 NKCFKEFITHYEKRKHMRCH---KIYICEECKKQFDKYNDFQKHKKEHDT-KEYCCDKCG 711
N C K Y H++ H + Y C+ CK F +++D ++H + H+ + Y C+ C
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 712 VSFKERILIVRHLKKH 759
F + RH +++
Sbjct: 507 KRFNRLDALNRHKQRN 522
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 451 YCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 603
Y C C + F + + L+ H Y HTG + F C+ C K F R+H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 32.3 bits (70), Expect = 0.094
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 319 HDNTVHLKIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEH--CKKYFRKIN 492
H + +V Y C EC+Q F+ +LK H G + C++ C K F +
Sbjct: 454 HTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSH--TGERPFVCDYAGCGKAFNVRS 511
Query: 493 QLRSHMYQH 519
+R H H
Sbjct: 512 NMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 442 INNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 603
+ +Y C CK+ F + H+ HTG K F+C+ C K F E +H+R H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 33.9 bits (74), Expect = 0.031
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 361 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQH 519
Y CP C +VF +++ RH+ + H G + C + CKK F + ++L H+ H
Sbjct: 4 YECPFCKRVFHRQEHQVRHI-RSH-TGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 30.3 bits (65), Expect = 0.38
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 604 KIYICEECKKQFDKYNDFQKHKKEH-DTKEYCCD--KCGVSFKERILIVRHLKKH 759
K Y C CK+ F + +H + H K + C C F R ++RH++ H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.9 bits (89), Expect = 5e-04
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 175 HKCTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLK 342
+KC F GCT +F+R +H +H N +AF L RH N H+K
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 409 KRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEK 582
K + + +G Y C+ C K F + R H HT K+F C C F
Sbjct: 3 KAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVL 62
Query: 583 RKHM 594
+H+
Sbjct: 63 NRHV 66
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 361 YSCPECMQVFANRQNLKRHMQKKHIQ 438
+ CP C F L RH+ +KH++
Sbjct: 47 FICPHCSSSFTRSDVLNRHVNQKHVK 72
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.1 bits (87), Expect = 8e-04
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 604 KIYICEECKKQFDKYNDFQKHKKEHDTKE-YCCDKCGVSFKERILIVRHLKK 756
+++ C++C K+F ++ + +HK H E C C + K + L+ RH+++
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQR 80
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 535 FKCNKCFKEFITHYEKRKHMRCH 603
F C++C K F H +H CH
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACH 53
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 358 IYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQHTGIKS 534
++ C +C + F +NL RH K C +C+ ++ + L+ H+ + KS
Sbjct: 30 VFPCDQCAKRFTRHENLTRH--KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 397 RQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQ-HTGIKSFKCNKCFKEFITH 573
RQ R G ++ C C K F++ LR H+ HT K F C C K F
Sbjct: 405 RQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Query: 574 YEKRKHMRCH 603
R+H R H
Sbjct: 464 DNLRQHERLH 473
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 361 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQH 519
+ CPEC + F ++L+RH++ H C C K F + + LR H H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI--CGKRFSRRDNLRQHERLH 473
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 481 RKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMR----CHKIYICEECKKQFDKY 648
R+ + ++ + + G KSF C +C K+F R+H+R K ++C C K+F +
Sbjct: 405 RQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Query: 649 NDFQKHKKEH 678
++ ++H++ H
Sbjct: 464 DNLRQHERLH 473
Score = 32.7 bits (71), Expect = 0.071
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 604 KIYICEECKKQFDKYNDFQKHKKEHDTKE--YCCDKCGVSFKERILIVRHLKKH 759
K ++C EC K+F + ++H + T E + C CG F R + +H + H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 685 KEYCCDKCGVSFKERILIVRHLKKHSKVIIDISLPXQKLW-KTYSRNSNLKQH 840
K + C +C FK HL++H + + P + K +SR NL+QH
Sbjct: 421 KSFVCPECSKKFKRS----EHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQH 469
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 166 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAFR 270
+K H CTF GC FSR LT+H H N + R
Sbjct: 51 EKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 34.3 bits (75), Expect = 0.023
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 451 YCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 603
Y C C K F ++ H+ HTG K C C K F E +H R H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 32.3 bits (70), Expect = 0.094
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 529 KSFKCNKCFKEFITHYEKRKHMRCH---KIYIC--EECKKQFDKYNDFQKHKKEH 678
+ +KC C K F + +H+R H K ++C C K+F + ++ +H + H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 361 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCC-EHCKKYFRKINQLRSHMYQHTGIKS 534
Y CP C + F ++ RH+ + H + C C K F + ++L H HT S
Sbjct: 26 YKCPLCTKAFYRLEHQTRHI-RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.5 bits (83), Expect = 0.003
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 436 QGINNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCNK 549
Q + Y CE C + F ++ L+ H+ HT K F C++
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +1
Query: 604 KIYICEECKKQFDKYNDFQKHKKEH-DTKEYCCDK-------CGVSFKERILIVRHLKK 756
K Y+CE C + F + ++H + H + K + C + CG F R L++RH +K
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 166 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAF 267
+KV + CT AF+R L +H+ +H N + F
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPF 98
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 361 YSCPECMQVFANRQNLKRHMQ 423
Y C C + FA ++LKRH++
Sbjct: 70 YVCETCTRAFARLEHLKRHIR 90
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Frame = +1
Query: 526 IKSFKCNKCFKEFITHYEKRKHMRCH---KIYICEE-------CKKQFDKYNDFQKHKKE 675
+K + C C + F ++H+R H K + C E C +QF + + +H+++
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 307 HLIRHDNTVHLKIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGIN 447
HL RH+ T H +K +SC C + FA L RH+Q+ H+Q N
Sbjct: 42 HLRRHERT-HENVKA---FSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 181 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLK 342
CT+ C +F+R L +H TH NV+AF L RH +HL+
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 34.7 bits (76), Expect = 0.018
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +1
Query: 370 PECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQ 516
P+C + F +++L+RH ++ H + + + C C + F + + L H+ Q
Sbjct: 31 PDCPKSFTRKEHLRRH-ERTH-ENVKAFSCSFCNRAFARSDVLNRHVQQ 77
Score = 33.9 bits (74), Expect = 0.031
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 406 LKRHMQKKHIQGINNYCC-EHCKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEK 582
LK+ + + YC C K F + LR H H +K+F C+ C + F
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 583 RKHMR 597
+H++
Sbjct: 72 NRHVQ 76
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 310 LIRHDNTVHLKIKTDVIYSCPEC--MQVFANRQNLKRHMQKKH 432
LIRH +T+H KT ++ C C + F+ L RH++ KH
Sbjct: 595 LIRHQDTIH--AKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 196 CTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTV-HLKIK 348
C T FSR + L +H T ++ + R H RHD V HL++K
Sbjct: 585 CNTVFSRTYDLIRHQDT-IHAKT-RPVFRCEICGDQRHFSRHDALVRHLRVK 634
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/67 (19%), Positives = 35/67 (52%)
Frame = +1
Query: 445 NNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICEE 624
+N ++CK+ F++ + S+ + K K F+ ++ K++++ + ++CE
Sbjct: 3243 DNILPDYCKQLFKEDFIVNSNGLKSYIFKLRKWRSYFERLLSKVPKKQYLEQYSSFLCEF 3302
Query: 625 CKKQFDK 645
++FD+
Sbjct: 3303 HHQKFDE 3309
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 496 LRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMR 597
L +H+ HTG K F C+ +C + F KHMR
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 475 YFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICEECKKQFDKYND 654
Y + ++ + H+ +T + + N C KE+I YE R I E+ + +K +
Sbjct: 97 YAKGMDDIMKHVATYTATMNERMNACHKEYIKMYEALASERNSLYKINEQNVQSLNKVKE 156
Query: 655 F 657
+
Sbjct: 157 W 157
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 610 YICEECKKQFDKYNDFQKHKK 672
+ CE C+K F K F+ HKK
Sbjct: 243 FYCEVCQKFFGKITVFEAHKK 263
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 493 QLRSHMYQHTGIKSFKCNKC-FKEFITHYEKRKHMRCHKIYICEECKKQFDKYNDFQKHK 669
QLR+ Q T I+ K + T ++ +YICE C K + + Q+HK
Sbjct: 92 QLRTPPPQPTSIRYLYFGTYRIKPWYTSPYPEEYSCAKNLYICESCLKYMNSDHVLQRHK 151
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 435 YVFLLHVTF*I-LTICKHLHTFWTTVNNICFYLQMYCIVM 319
Y F VTF LT C TFWT V N ++ ++ +V+
Sbjct: 162 YFFNYFVTFPFELTTCAITFTFWTDV-NCAVWISIFLVVV 200
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 373 ECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMY 513
EC+Q FA LK QK H NY E KK + L + Y
Sbjct: 1100 ECLQSFA----LKSSPQKSHWLRKRNYIAEKRKKILENLASLNYYEY 1142
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 427 KHIQGINNYCCEHCKKYFRKINQLRSH 507
K I N C C K FR NQL +H
Sbjct: 262 KEIVNSNPIMCMVCNKNFRSQNQLENH 288
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 795 LXGQGNVDYYFGMFFQMSNNEYSLLKTN 712
L GQ D+YFG+ F + + YS + T+
Sbjct: 93 LKGQDERDFYFGLLFGLQSIVYSGILTH 120
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 346 KTDVIYSCPECMQVFANRQNLKRHMQKKHIQ 438
+ D++Y C C + + + +RH +K +Q
Sbjct: 208 EVDIVYICSFCFCYYGSERQFQRHREKCTLQ 238
>SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 622 ECKKQFDKYNDFQKHKKEHDTK 687
E K + K +DF+ H K++DTK
Sbjct: 92 EIPKVWKKLSDFEPHSKKNDTK 113
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 397 RQNLKRHMQKKHIQGINNYCCEHCK--KYFRKI 489
R +LK + ++ ++ N+ C+HCK YF ++
Sbjct: 641 RYDLKEILYRELMEDAENWQCQHCKAFSYFSQV 673
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,497,561
Number of Sequences: 5004
Number of extensions: 74591
Number of successful extensions: 320
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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