Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_G02
         (823 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0940 - 29539138-29539626,29540125-29540531,29540631-295406...    30   1.9  
11_01_0619 - 4961588-4962409                                           29   5.9  
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195...    28   7.8  
03_02_0519 + 9066918-9068261                                           28   7.8  

>04_04_0940 -
           29539138-29539626,29540125-29540531,29540631-29540662,
           29540809-29541086,29541164-29542515,29542616-29542874
          Length = 938

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 705 QRNHFSDFVSDFFLFPESSDTGRDPQRLSIFSLSAL 598
           QR H     SD     ++S+  +DP RL ++S SAL
Sbjct: 802 QRIHDKWLASDMSSMSQASELDQDPDRLDVYSFSAL 837


>11_01_0619 - 4961588-4962409
          Length = 273

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 569 RRHMLLASNNRADKEKIDNLCGSRPVSDDSGNRKKSLTKSEK 694
           RRH    S++ + +   ++   S   SDD G+RKKS  +S +
Sbjct: 231 RRHRRETSSSASSESDSESASASDSDSDDKGSRKKSRKRSAR 272


>09_01_0129 -
           1954470-1955129,1956285-1956371,1956475-1956663,
           1956772-1956900,1957386-1957472,1957572-1958036,
           1959844-1959923,1961295-1961358,1961444-1961455
          Length = 590

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 499 KIASRERSDGRYSLRTTLLMN-VSETPHVI 585
           KI SRER +G Y + T ++ N +S TP+++
Sbjct: 371 KIFSRERLNGHYGVTTFVISNTLSSTPYLL 400


>03_02_0519 + 9066918-9068261
          Length = 447

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 142 AVGDGINCVISFSTVRATRENVLGRERSQRTTQIL 38
           AVG    C+ S+S+  AT  N  G + S+  T +L
Sbjct: 165 AVGAYFGCITSYSSTTATNSNGTGTDVSEAATGLL 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,488,568
Number of Sequences: 37544
Number of extensions: 406851
Number of successful extensions: 952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)