Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F24
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021212-1|AAX33360.1|  758|Drosophila melanogaster SD03462p pro...    30   4.9  
AJ289232-1|CAC81969.1|  758|Drosophila melanogaster matrix metal...    30   4.9  
AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,...    30   4.9  
AE013599-906|AAS64885.1|  758|Drosophila melanogaster CG1794-PB,...    30   4.9  

>BT021212-1|AAX33360.1|  758|Drosophila melanogaster SD03462p
           protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 69  IKKDYERGNKFKTSVQYNILILKSYMKGELIFM*NVDKDEFKKSNIFIAHNKHLFNRQR 245
           ++ DY R     + V YNI     Y+ G+  F  N+   EF    + +AH +   + +R
Sbjct: 645 VELDYPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARR 703


>AJ289232-1|CAC81969.1|  758|Drosophila melanogaster matrix
           metalloproteinase 2-MMP protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 69  IKKDYERGNKFKTSVQYNILILKSYMKGELIFM*NVDKDEFKKSNIFIAHNKHLFNRQR 245
           ++ DY R     + V YNI     Y+ G+  F  N+   EF    + +AH +   + +R
Sbjct: 645 VELDYPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARR 703


>AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,
            isoform A protein.
          Length = 1136

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 69   IKKDYERGNKFKTSVQYNILILKSYMKGELIFM*NVDKDEFKKSNIFIAHNKHLFNRQR 245
            ++ DY R     + V YNI     Y+ G+  F  N+   EF    + +AH +   + +R
Sbjct: 1023 VELDYPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARR 1081


>AE013599-906|AAS64885.1|  758|Drosophila melanogaster CG1794-PB,
           isoform B protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 69  IKKDYERGNKFKTSVQYNILILKSYMKGELIFM*NVDKDEFKKSNIFIAHNKHLFNRQR 245
           ++ DY R     + V YNI     Y+ G+  F  N+   EF    + +AH +   + +R
Sbjct: 645 VELDYPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARR 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,922,548
Number of Sequences: 53049
Number of extensions: 580362
Number of successful extensions: 1081
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)