Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F20
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237...    31   1.2  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.1  
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118...    30   2.8  
05_05_0044 - 21819193-21819418,21819531-21820759                       29   6.4  
03_06_0742 + 35900505-35900519,35901230-35901281,35901647-359017...    28   8.4  
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000...    28   8.4  

>03_05_0010 +
           19622430-19622512,19622539-19623082,19623361-19623767,
           19623831-19624167,19624290-19624508,19625522-19625826,
           19626128-19626287,19626422-19626547
          Length = 726

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = +1

Query: 592 NIKTYRSQGDGARTTTPRPDHFNESIMTESRLXLRDPTPPIGNG 723
           NI  Y  QGD  R   PRP    E+I T      RDP  P   G
Sbjct: 187 NINGYHPQGDQGRNQ-PRPRTIKEAITTRGGKSTRDPPYPNPTG 229


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 1/103 (0%)
 Frame = +1

Query: 424  GTKAPPREIQLDNAVLPTDPGMVR-VSTPPRIITLDQHYFPSADDFPHGMPNNSPPRNIK 600
            G   PP  I       P  PG +  V  PP I  L  H  P A   P G+    PP  + 
Sbjct: 1096 GVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPV- 1154

Query: 601  TYRSQGDGARTTTPRPDHFNESIMTESRLXLRDPTPPIGNGEG 729
                 G G     P P  F       +      P PP   G G
Sbjct: 1155 ----GGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHG 1193


>08_02_0550 +
           18509365-18509589,18509668-18510644,18510828-18511802,
           18511885-18512142,18512216-18512326,18512418-18512496,
           18512595-18512687,18512773-18512958
          Length = 967

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 30/123 (24%), Positives = 48/123 (39%)
 Frame = +1

Query: 226 QYPPEEAYTRLISHNMTVPQRIKATGDIIDDETAPNGMVSGWDYANEKFDMKVPERILVI 405
           +Y  E   T  ++    +P R     DI DD           D+   + D   PE I+ +
Sbjct: 397 RYKEETGKTIQVATGRAMPGRRFHCQDIPDDYAKEEVRTVNEDHRMYEIDFPTPEDIVYL 456

Query: 406 GQDQHVGTKAPPREIQLDNAVLPTDPGMVRVSTPPRIITLDQHYFPSADDFPHGMPNNSP 585
           G           ++IQL +    TD       +PPRI+    H   + D+ P   P ++ 
Sbjct: 457 GDAVDQIILWHKKDIQLGS----TD-------SPPRILRSLCHALRNMDEEPRDPPEDAS 505

Query: 586 PRN 594
           PR+
Sbjct: 506 PRH 508


>05_05_0044 - 21819193-21819418,21819531-21820759
          Length = 484

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 649 DHFNESIMTESRLXLRDPTPPIGNGEGLSTAEELV 753
           D ++ES+   S +  + P PP G G G++  E+ +
Sbjct: 294 DRWDESLARLSGVAPQQPAPPAGTGAGMAVDEQAI 328


>03_06_0742 +
           35900505-35900519,35901230-35901281,35901647-35901772,
           35902303-35902613,35902745-35902988,35903726-35903976,
           35904071-35904277,35904546-35904713,35904798-35905127,
           35905266-35905400
          Length = 612

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +1

Query: 79  KENGLTFKLKVLRFEKNKLGFAS*RYSGKSNQMK*IKETNFTSININSMQYPPEEAYTRL 258
           K+ G  F+LK    +K         Y+G  +Q K ++E +   + ++   YPP++    +
Sbjct: 445 KKLGNVFELKENPKKKKARTQDRLTYTGADDQAKLLEEPSAEKVGVSEALYPPKKKAGEI 504

Query: 259 ISHN 270
             HN
Sbjct: 505 GDHN 508


>03_06_0614 -
           35099225-35099461,35099545-35099694,35099919-35100066,
           35100152-35100231,35100428-35100594,35100692-35100940,
           35101025-35102310,35102423-35102544,35102946-35103272
          Length = 921

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 583 PPRNIKTYRSQGDGARTTTPRPDHFNESIMTE 678
           PPRN  + RS GD +R+T  R    + S+  E
Sbjct: 341 PPRNDHSGRSSGDSSRSTASRKHDDSASLSAE 372


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,278,319
Number of Sequences: 37544
Number of extensions: 525814
Number of successful extensions: 1172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)