Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F19
         (844 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     81   5e-17
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    26   1.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   1.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 80.6 bits (190), Expect = 5e-17
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 53  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
           QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 40  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77



 Score = 80.6 bits (190), Expect = 5e-17
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 53  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
           QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153



 Score = 78.6 bits (185), Expect = 2e-16
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +2

Query: 53  QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
           QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 IYMPPRSLKTKCKVDSFW 118
           +Y+PP   K+ CK+D  W
Sbjct: 120 LYVPPGIFKSTCKIDITW 137


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 IYMPPRSLKTKCKVDSFW 118
           +Y+PP   K+ CK+D  W
Sbjct: 137 LYVPPGIFKSTCKIDITW 154


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 IYMPPRSLKTKCKVDSFW 118
           +Y+PP   K+ CK+D  W
Sbjct: 137 LYVPPGIFKSTCKIDITW 154


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 IYMPPRSLKTKCKVDSFW 118
           +Y+PP   K+ CK+D  W
Sbjct: 152 LYVPPGIFKSTCKIDITW 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,567
Number of Sequences: 2352
Number of extensions: 5881
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)