Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_F19
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 1e-15
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 81 1e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 81 1e-15
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 79 4e-15
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 79 4e-15
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 40 0.002
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 37 0.016
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 35 0.083
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 35 0.083
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 31 1.4
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.1
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 420 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 420 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 496 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 572 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 648 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 724 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 761
Score = 78.6 bits (185), Expect = 5e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 800 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 192 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 268 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 420 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 496 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 572 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 648 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 724 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 761
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
QQRLIFAGKQLEDGRTLSDYNIQK+STLHLVLRLRGG
Sbjct: 800 QQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 40 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
QQRLIFAGKQ+ D +T +DY + S LHLVL LRGG
Sbjct: 40 QQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 157
QQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 200 QQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 86 EDGRTLSDYNIQKESTLHL 142
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 62 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 151
L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 34.7 bits (76), Expect = 0.083
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
+QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 34.7 bits (76), Expect = 0.083
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 53 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163
+QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 59 RLIFAGKQLEDGRTLSDYNIQKESTLHL 142
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 257 EYLKCFAYFCFRSVNQTTNSNTTIFNSCISTCHHG 153
E ++C +FCF ++ T+SN + + CI+ G
Sbjct: 255 EGIQCRGHFCFITIVDHTSSNNSYYKGCITANEQG 289
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 59 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 157
R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,021,507
Number of Sequences: 27780
Number of extensions: 158167
Number of successful extensions: 299
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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