Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F18
         (952 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   9.4  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   9.4  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   9.4  

>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin
           Nipped-B protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 244 STFSLNSSIVFFALSASVFRLLSSLGASRLTNACTLARQIATQDNQQLVH 95
           S  SLN S++F AL A+    L S+    L      A +    DN +L+H
Sbjct: 35  SAASLNKSLLFHALVANESSNLLSMRNENLVRQLVTAIERTNSDNIELIH 84


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
           isoform F protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 244 STFSLNSSIVFFALSASVFRLLSSLGASRLTNACTLARQIATQDNQQLVH 95
           S  SLN S++F AL A+    L S+    L      A +    DN +L+H
Sbjct: 35  SAASLNKSLLFHALVANESSNLLSMRNENLVRQLVTAIERTNSDNIELIH 84


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
           isoform E protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 244 STFSLNSSIVFFALSASVFRLLSSLGASRLTNACTLARQIATQDNQQLVH 95
           S  SLN S++F AL A+    L S+    L      A +    DN +L+H
Sbjct: 35  SAASLNKSLLFHALVANESSNLLSMRNENLVRQLVTAIERTNSDNIELIH 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,884,988
Number of Sequences: 53049
Number of extensions: 468356
Number of successful extensions: 1034
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4730695893
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)