Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F16
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    25   7.1  

>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
            T16G12.5 protein.
          Length = 1142

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +1

Query: 181  PKEXNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 348
            P E  S N   + AKK + +L+  V    AP     T ++ +   VD  NE+ + L   E
Sbjct: 834  PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 809 SXGGGGXFXXXKXPPPPPP 753
           S GGGG       PPPPPP
Sbjct: 289 SSGGGGYSAPAAAPPPPPP 307


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 809 SXGGGGXFXXXKXPPPPPP 753
           S GGGG       PPPPPP
Sbjct: 289 SSGGGGYSAPAAAPPPPPP 307


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 25.0 bits (52), Expect(2) = 7.1
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 757 GGGGGXXXXKKXPPPPXEXG 816
           GGGGG       PPPP   G
Sbjct: 43  GGGGGCGGGCAPPPPPPACG 62



 Score = 21.8 bits (44), Expect(2) = 7.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 733 FFFXXXXGGGGGG 771
           F F    GGGGGG
Sbjct: 18  FLFPSGGGGGGGG 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,549,617
Number of Sequences: 27780
Number of extensions: 242966
Number of successful extensions: 2040
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)