Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_F14
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    30   2.3  
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621           29   6.9  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   6.9  

>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 564 PPPXXXGXFFXXPXPXPPXKNPXPXXXGGGG 656
           PPP     F   P P PP     P   GGGG
Sbjct: 67  PPPPPAAFFAAVPPPPPPPFEYYPAVGGGGG 97



 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +1

Query: 565 PPXGXXGFFFXPPXPXPPKKTXXPGFXGGGG 657
           PP     FF   P P PP     P   GGGG
Sbjct: 67  PPPPPAAFFAAVPPPPPPPFEYYPAVGGGGG 97


>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
          Length = 283

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 680 PPXXXXKXPPPPXXPGXXVFXGGXGXGG 597
           PP    + PPPP   G  V  GG G  G
Sbjct: 53  PPDDGGEFPPPPDDGGEGVSEGGAGVAG 80


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 600 PXPXPPXKNPXPXXXGGGG 656
           P P PP ++P P   GGGG
Sbjct: 9   PPPPPPPQHPPPPQAGGGG 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,785,211
Number of Sequences: 37544
Number of extensions: 228954
Number of successful extensions: 1016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)